Chelonoidis abingdonii (Abingdon island giant tortoise): 116828451
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Entry
116828451 CDS
T07367
Symbol
ITGA5
Name
(RefSeq) integrin alpha-5 isoform X1
KO
K06484
integrin alpha 5
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03266
Virion - Herpesvirus
cabi04145
Phagosome
cabi04510
Focal adhesion
cabi04512
ECM-receptor interaction
cabi04810
Regulation of actin cytoskeleton
cabi05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
116828451 (ITGA5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116828451 (ITGA5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116828451 (ITGA5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116828451 (ITGA5)
09142 Cell motility
04810 Regulation of actin cytoskeleton
116828451 (ITGA5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116828451 (ITGA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cabi04147
]
116828451 (ITGA5)
04515 Cell adhesion molecules [BR:
cabi04515
]
116828451 (ITGA5)
04090 CD molecules [BR:
cabi04090
]
116828451 (ITGA5)
Exosome [BR:
cabi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116828451 (ITGA5)
Cell adhesion molecules [BR:
cabi04515
]
Integrins
Integrin alpha subunits
116828451 (ITGA5)
CD molecules [BR:
cabi04090
]
Proteins
116828451 (ITGA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
116828451
NCBI-ProteinID:
XP_032642575
Ensembl:
ENSCABG00000004246
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MPPPGTLLLPLLLLLALPPARAFNLDVAEPALFRGAPGSLFGFAVDFYLPEPQSSISILV
GAPKANTSQPNVTQGGAVYYCPWHRGNSSCTPIEFDQTESRQHDFSGNGTDGLTPVEFKS
LQWFGATVRSHGSSILACAPLYSWRTLKEESGRDPVGTCYLSVSNFTKFVEYSPCRSDLN
SAAGQGYCQGGFSAEFTKTGRVLLGGPGSYFWQGQVISATQEQIKEAYYPEYLILDTQGQ
LQTRQAAPVYDDSYLGYSVAVGEFSGDSTEDFVAGVPKGNLTYGYVTVLNGSDMKSLYNF
SGEQMAAYFGYAVAAADVNGDGLDDLLVGAPLFMEKTEDGRVQEVGRVYIYLQQPHGMEL
NASMVLTGHQEFGRFGSTIAPLGDLDQDGYNDVGIGAPFGEDAQQGTVYVYNGQAGGVNA
QPSQVLRGHWPHNRSPDFFGFALRGAKDLDGNGYPDLIVGAFGVDTAMVYRGRPIVYASA
SLNIFPAMFNPEERSCTLEGTDTHVACINLSFCLNASGKHVPDSIGFTVELHLDHLKQKG
AVKRALFLHSRQPHLVQTIQVHNGALEECREMKIYLRNESEFRDKLSSIHVALSFGLDPQ
APADAHGLQPILNYLTKSYIERKAQIQLDCGEDNICVPDLQLDVFGEHSVVYLGDKNALN
LTFNARNRGEGGAYEAELYVILPAEADYSGVIRNHGNFTNLSCAYNSVNRTRMVICDLGN
PMKSGTSLWGGLRFTVPHLRDKKNIQFEFQIRSKNENNSHSEVVAFPLRVEASARVSSHG
VSKPEVVFFPVSGWKPARSPEKEQDVGPEVQHVYELVNEGPSTISHGVLELSCPMSFQGK
PVMYVTRYSVPANCTSGQPVNPLKLQLEKSPTTSPSLEQHYLQRRDAVRSSGASGSPHTL
KCPEAECFQLTCQVGTLQRQQRISLWLYFRIWAKTFQQKENQPQALQCEAVYQAHRMPYK
IQPQDYPREALKVSTAIQWVKPESSHGVPLWIIILAILLGLLLLALLIYVLYKLGFFKRS
LPYGTAMEKAQLKPQAASEA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccccgggaccctgctgctgccgctgctgctgctgctcgccctgccgcctgcc
cgcgccttcaacctggacgtggccgagccggcgctgttccgcggagccccgggcagcctc
ttcggcttcgccgtggatttctacctcccggagccccagagcagtatcagcatcctcgtc
ggagctcccaaggccaacacaagccagcccaatgtcacacagggcggggccgtttactac
tgcccctggcaccggggcaacagcagctgcacccctattgaatttgaccagacagagtcc
cgccaacatgacttcagtgggaatggcacagacgggctgacaccggtggagttcaaatcc
ctgcaatggttcggagcaacagtgcggtcccacggcagctccatcctggcctgcgccccc
ctgtacagctggcgcaccctcaaagaagaatctggccgagacccagttggcacctgctac
ctgtctgtcagcaacttcaccaagttcgtggagtattcgccctgccgctcagatctgaac
tcggcggctgggcagggttactgccagggtggctttagcgctgagttcaccaagacgggg
cgagtgctgctgggaggccctggaagctatttctggcaaggccaggtgatctcagccacc
caggagcagatcaaggaggcctattaccccgagtatttaatcctggacacccaggggcag
ctgcagacacgccaggctgcccctgtctatgatgacagctatctgggatattctgtggcc
gtcggtgagttcagcggggattccactgaagactttgtggctggtgttcccaagggaaac
ctgacctacggctacgtcactgtcctgaatggatcagacatgaagtccctgtataacttc
tctggagagcagatggcagcctacttcggctacgcggtggctgctgctgatgtgaacggt
gacggcctggacgacttgctggtgggcgccccgctgttcatggagaagacagaggatggg
cgggtgcaggaggtgggcagagtctacatctacctgcagcagccccatggcatggagctc
aatgcctccatggtgttgaccgggcaccaggagttcggccggtttgggagcaccatcgcc
ccgctgggagacctggatcaggatggctataacgacgttggcatcggggctcccttcggc
gaggacgcgcagcagggcacggtatatgtgtacaacggccaggcaggcggggtgaacgcc
cagccctcgcaggtccttcgggggcactggccgcacaaccgctcgcccgacttcttcggg
ttcgccctccgtggagccaaggacctggacggaaatggctacccagacctgattgtgggc
gcattcggagtggacacggccatggtgtaccgaggccgccccatcgtctacgccagtgcc
tccctcaacattttccccgccatgttcaaccctgaagagcgatcctgcacactggagggc
accgacacccacgtggcctgcataaacctgagcttctgcctcaacgcctcagggaagcac
gtgcctgactccattgggttcactgtggagctgcacctggaccacctgaagcagaagggg
gccgtcaagcgggcgctgttcctgcactcccgccagccccacctggtgcagaccatccag
gtgcacaacggcgccctggaggagtgcagggagatgaaaatctacctccggaatgagtca
gagttccgcgacaagctgtcctccatccacgtggcgctgagcttcggcctggacccgcag
gccccagcagacgcccacgggctgcagcccatcctcaactacctcaccaagagctacatc
gagcggaaggcccagatccagctggactgtggtgaggacaatatctgcgtccctgacttg
cagcttgatgtctttggggagcacagtgtggtgtacctgggggacaagaacgccctgaac
ctgaccttcaatgcccgcaatcgcggggagggtggcgcctacgaagccgagctctacgtc
atcctgcccgctgaggccgactactctggggtgatccgcaaccatgggaacttcaccaac
ctgagctgcgcctacaactcggtgaaccggacccgcatggtgatctgtgacctcggcaac
cccatgaagtcgggcaccagtctctgggggggcctgcgcttcaccgtcccccatcttcgt
gacaagaagaacatccagtttgagttccagatccggagcaagaacgagaacaactcccac
agtgaggtggtggcgttcccgctccgcgtcgaggcctccgccagggtctcctcccacggg
gtctccaagcctgaggtcgtgttcttccccgtctcgggctggaagcctgccaggagtccg
gagaaggagcaggatgtgggccccgaggtgcagcatgtgtatgagctggtgaatgagggt
cccagcaccatcagccacggggtcctggagctgagctgccctatgagcttccaagggaaa
ccggtgatgtacgtgactcgctactcggtgccggccaactgcacctccggccagcctgtc
aacccactgaagctgcagctggagaagagtcccaccacctctcccagcctggagcagcat
tacctgcagagacgagacgcggtgcggagcagtggggcctccgggagcccccacaccctg
aagtgccccgaggccgagtgcttccagctgacctgtcaggtggggacgctgcagaggcag
cagcggatcagcctttggctttacttccggatatgggccaaaactttccagcagaaagag
aaccagccccaggccctgcaatgcgaggccgtgtaccaggcccacaggatgccctacaag
atccagccccaggattaccccagagaggccttaaaggtgtccacagcgattcagtgggtg
aaaccggagagcagccacggggtcccgctgtggatcatcatcctggccatcctgctgggg
ctgctgctgctggcactgctcatctacgtgctgtacaagctggggttcttcaaacgctcc
ctgccctacggcacggccatggagaaggctcagctcaagccacaggcggcctcagaggca
tag
DBGET
integrated database retrieval system