Chelonoidis abingdonii (Abingdon island giant tortoise): 116831661
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Entry
116831661 CDS
T07367
Symbol
REV3L
Name
(RefSeq) DNA polymerase zeta catalytic subunit
KO
K02350
DNA polymerase zeta [EC:
2.7.7.7
]
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116831661 (REV3L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cabi03400
]
116831661 (REV3L)
Enzymes [BR:
cabi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116831661 (REV3L)
DNA repair and recombination proteins [BR:
cabi03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
B-family DNA polymerases
116831661 (REV3L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4683
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
Motif
Other DBs
NCBI-GeneID:
116831661
NCBI-ProteinID:
XP_032647718
Ensembl:
ENSCABG00000016095
LinkDB
All DBs
Position
Unknown
AA seq
3126 aa
AA seq
DB search
MIAVPRGQKTCLHLHGIFPYLYVPYDGYGKQSEHYLRQVAFSIDRALNVASGNPSSTVQH
VFKVSLVSGMPFYGYHEKEREFMKIYLYNPSMVKRVCELLQGGAIMNKFYQPHEAHIPYL
LQLFIDYNLYGMNLINLAAVKFRKAKRRSDTLGGIGCYKDHLPENSITGTFFRWEEDEIP
SSLILDGVEPQSTCELEVDAVAADILNRLDVEAQIGRNPGLQAIWEDEKQRRREKNESSQ
ISPSDSQDRGFVPTTESEKIFQKRLKEILKQNDFSVTLSGSVDYSNGSEEFSAELTLHSE
VLSPKAVPCSPANMVEVHKDDKLNTEPNRDASKEEDVLINEEAILNIMENSQCFHPLSQR
LNQTAVFMDSSSDQAMIHLLAGLEDDGYQMGGHRTLSQNHSLGSNRNLQNSDDEENEPQI
EKEEMELSLLMSQRWDSSNEEHREKRRSVSKNMHRSSTEEEDLSSEEEMEWSGNSLLLAN
LSIPQLDGTADENGDNPLNNESSRTHSSIIAASKMSVKTSMFHKDATTLEPPSSAKITFQ
CKHTSALSSHVLNNEDLVEELSQPNTEVRSDLSVHSFTKESAHAAKCPTSFSNSAHSENS
HKESNKDILPVSSCENNIFDYEEDISSVSRQIPSRKYTSIRKVEKDDASFMHMSCHISDS
VLSKNSFSFSELSLSKNKIPSEANEKSSSTGINSFFPSAVTESCELVSCSGGNRTAGHCV
ESSTDEEGSLNKLKIRYEEFQEHKTEKPSLSQQAAHYMFFPSVVLSNCLSRPQKLAPVTY
KLQQGNRQSRLKLNKKKLGLGNHQEPAGVSDIASTKESCNTQDDACSIIPGKDSALSSDL
VQVPHGAFENKMTTYNANCIDCQFRDGSLETEQSFGLCGNKYTLRTKRKVNYETEDSESS
FFMHNSKISLPQPIESVESLGGSQKSRKRRKLSKKLPPVIIKYIIINRFRGRKNMLVKIG
KIDSIEEQVMLTEEKMNLYKKLAPLKDFWPNVPDSPATKYPIYPLTPKKSHRRKAKHKSA
KKKLGKPQKASSKNIKRTLSFRKRTHAILSPPSPSYNAEAEDCDYHYSDVMSKLGFLSER
SISPVNASPPRCWSPTDPKAEEIINGLDKEASLIKGPNMYISKTVNSIGGKNSRAKTQVK
KCKKKFATVATKKRNKINQTNKTANDVKKKPRTKPRQKIAEKISRKRMTVKDEKGNTCSA
AEVKFVLKQQDLPEITHNFCSSQPLLTQKDVPLTGYSTGHLPSTQLPSTADVQGNSSCYF
HPLLETDKPVDLRGLSSPRENLHSSVISAPVIPGREITKINSQRSKSQNAVFRMKESSLI
QNNIFDPFNHSSQVTHNVCISKDKTATKTEEIINSQNRYLSSVGKLNETHSFLDTMKTDQ
LHTTNFLHCKDSNQQQIVCLPEVSKHADPYSSILKSSEEGHGSLQLPKNCFVTSLRSPVK
QLRWEQKQRGFIFDMSHFKPERIKHRSLSETISQTKTISQCENRTVMTPSAFSEGQSGLA
VLKELLQKRQQKAQHAGILQEPLSVSPQIKKSISCSPEQHKASKRSQSVTSPRKSRTPRN
TKPKEKTPKPLKVASSNQHNTTQSDHFISDDSPIFFSDPGFESCYSLEDSLSPDHNYNFD
INTIGQTGFCSLYSASQFVPADQSLPQKFLSDAVQDLFPGQTAENELFSHNSQKSEEEKH
RSSDSSTWITSGALSPELFEKTSMDNNENHHHGQWRNNVHPSASRTSSSVDIFCTQQAGD
YVNEKFKLNRNPVNKEVFLSLPQSSCSDFIQSCTRKETTFEPCQPLGSINTSFTSVLSSP
DGELMDAASEDLELYVSRNNEGLTPTPDSSPRSTSSPSQSKNGSFTPRTAHILKPLMSPP
SREEIMATLLDHDLAETIYQEPFCSNPSDAPEKPREIGGRLLTVETRLPNDLPEFEGDFS
LEGLRLWKTAFSAMTHSPRPGSPPRNCHSIAGKGEINSHKTSEDKKIVIMPCKCAPSRQQ
VQMWLHAKEEYEHIKKLPKAQPVDTENATENFRSIALPIDQPTEVVKAAKNFSLPSLQDS
IPIVPTKDAPVSQADPTPTQTKETCDKYINTVQISTNTIEPSKTPPESRTLLLAPSAIEL
DKEEEDDDYYVNYSSPDSPVLPPWQQAASPDSKPSSLEDADWQSQNIISSPVKENDTAHS
ENVQKHVRDEGRASFSTSPLLVREGAGSSESVCLHSTPIVQRKCQERIAEALDFTPLSTE
PKMQKLNHRRGSNSDTLRRVLLTTQVKNQFAALNAPKKETSQIEGPSLNNSYGFKVSVQN
LQEAKALHEVQNLTLISMELHARTRRDLEPDPEFDPICALFFCISSDAALPNTDKREITG
AIVIDKDRTISSQGSRDQAPLLTRSGITGLEVTYAADERALFQEVVNIVKRYDPDMMLGY
EVQMHSWGYLLQRAAALSVDLCQMISRVPDDKKENRFAAEQDEYGSDTMSEINIVGRIML
NLWRMMRHEVTLTNYTFENVGFHVLHQRFPLFTSRVLSDWFDNKADIYRWKMVDHYISRV
RGNLQMLEQLDLIGRTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQ
QRAQMKAPQCIPLIMEPESRFYSNTVLVLDFQSLYPSIVIAYNYCFSTCLGHIENLGKFD
EFKFGCTSLRVPPDLLYQIRHDITVSPNGVAFVKPSVRKGVLPRMLEEILKTRIMVKQSI
KAYKHDKAITRMLEARQLGLKLIANVTFGYTSANFSGRMPCIEIGDSIVHKARETLERAI
KLVNDTKKWGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVY
LPCVLQTKKRYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSIKLLFETRDIS
QIKQYVQNQCMKLLEGKASMQDFIFAKEYRGSSAYRPGACVPALEITRRMLAYDRRSEPR
VGERVPYVIVYGMPGLPLIQLVRRPIEVLQDTSLRLNATYYITKQILPPLARIFSLIGID
VFSWYHELPRIQRAASTARTELEGRKGTISQYFTTLHCPVCDELTQRGICSKCRSQPQHV
AVILSQEIRELERKQEQLVKICKNCTGCFDRQIQCVSLNCPVLFKLSRVSRELSKAPYLR
QLLDQF
NT seq
9381 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgtgccgcgaggtcagaagacgtgtctccatttacatggtatctttccttat
ctctatgtgccatatgatggttatgggaagcagtcagaacactatcttcgtcaggtggca
ttcagcattgaccgagcactcaatgtggcttcaggcaatccatcttctactgttcaacat
gtgttcaaagtgtcattagtatctggaatgcctttttatggttatcatgaaaaggagaga
gagtttatgaagatatatctttacaatccttcaatggtgaaaagagtatgtgagctttta
caaggtggagccataatgaataaattttaccagcctcatgaagcccatattccctacctc
ctgcaactgtttatagactacaacctgtatggaatgaatttaataaacctggctgctgtc
aaattcagaaaggcaaagagaagaagtgatactttaggtggaattggatgttacaaagat
catttgccagaaaattccattactggaactttttttcgatgggaagaggatgaaatacca
agctctttaatactagatggtgttgaaccacagagtacctgtgaactggaggtggatgca
gtagctgctgatattttaaatcgattggatgttgaagcccagattggcaggaaccctggt
ttgcaagctatatgggaagatgaaaagcagcgccggagagagaagaatgaatcgtctcag
attagtccatctgattcacaagatcgtggatttgtgccaacaacagagagtgaaaaaatc
tttcaaaagagacttaaggaaattctcaagcaaaatgacttctctgtaacattgtcaggc
tcagtggactacagtaatggatcagaggagttctctgctgagttaacactacattcagag
gtactttctcctaaagcagttccatgttcaccagccaatatggtggaagtgcacaaagat
gataagctgaacacagaacctaacagggatgctagtaaagaggaggacgtgcttattaat
gaagaagctattttaaacatcatggaaaatagtcagtgttttcatccactgtctcagaga
ctgaatcagactgcagttttcatggacagtagttctgatcaggccatgatacacctgtta
gctggtttggaggatgatgggtatcaaatgggaggacacagaacgttatctcaaaatcat
tctcttggaagcaacagaaatctccagaacagtgatgatgaagaaaatgaaccacagatt
gaaaaggaagagatggaactcagtttgcttatgtctcaaagatgggatagcagcaatgaa
gagcatagggaaaaaagaaggtcagtgagcaaaaatatgcatagaagctcaactgaagag
gaggatttatcttcagaagaagaaatggaatggagtggtaacagtttgcttctagctaat
ctctctatacctcagttagatggaaccgcagatgaaaatggtgacaatcctttgaataat
gaaagttctcgaactcactcctccataattgcagcaagtaaaatgtccgtaaagacctcg
atgtttcacaaagacgctactacgcttgaacccccatcttctgctaagattacttttcag
tgtaaacacacaagtgccctttcttcccatgttttgaacaatgaagatttagtagaagag
ctttcacaaccaaacactgaagtaagatctgatctttcagtccattctttcacaaaagaa
agcgcacatgctgcaaaatgtccaacatcattcagcaatagcgcccattctgaaaactct
cacaaggagagtaataaggatattcttccagtttcttcatgtgaaaataatattttcgac
tatgaagaagatatttcatcggtgagcagacagataccaagcaggaagtacaccagcatc
agaaaggtagaaaaagatgatgcctcttttatgcatatgagctgccacattagtgatagt
gtgttgagtaaaaactcattcagtttttcagagttaagcctctccaaaaataaaatacct
tctgaagcaaatgaaaaatccagcagcacaggtataaatagctttttcccttcagcggta
acagaaagttgtgaactggtgtcttgctcaggagggaatcgaactgcggggcattgtgtt
gaaagtagcactgatgaagaaggtagccttaataaacttaaaattaggtatgaagaattt
caggagcataagacagaaaaaccaagcctcagtcaacaagcagcacattatatgtttttt
cctagtgtggttctttctaattgtctcagccggccacaaaaattagctcctgtgacgtat
aaattacagcagggcaacagacaatccaggttaaagctgaataaaaagaaactgggtctt
ggcaatcatcaggagcctgcaggtgtcagtgatattgcatccacaaaggaaagctgcaat
acacaagatgatgcttgcagtatcattcctggcaaggacagtgcattatctagcgatttg
gttcaagttcctcatggtgcttttgaaaacaaaatgactacatataatgctaattgtatt
gactgccaatttagagatggatccctggaaacagagcagtcatttggattatgtgggaat
aaatatacactccgaactaaacgaaaagtaaattatgagactgaagacagtgaatcaagt
tttttcatgcacaactcaaaaattagcctacctcagcccatagaaagtgttgaaagtttg
ggtgggtctcagaaatctcgaaaacgtagaaaactctctaaaaaactgccacctgttatt
atcaaatacattatcattaatagatttagaggcagaaaaaatatgcttgttaaaatagga
aaaatagactctattgaggaacaagtgatgcttacagaagaaaagatgaacctatataaa
aagcttgcacctttaaaggacttttggccaaatgttcctgactcccctgcaaccaaatat
cctatttatccattaacaccaaagaaaagtcacagacggaaagcaaaacataagtcagct
aagaaaaaacttggaaaaccacaaaaagcaagtagtaaaaatattaaaagaactttatct
ttcagaaaaagaactcatgcaatcctttctcccccttcaccatcttataatgctgaagct
gaagactgtgactatcattatagtgacgttatgtctaaattaggttttctctctgagaga
agcataagtccagtaaatgcatctccccctcgctgctggtctcccactgatccaaaagca
gaagaaattataaatggactagacaaagaagcttcacttattaagggtcctaacatgtac
atcagcaagactgttaattccattggaggaaaaaatagtcgagcaaaaactcaggttaag
aaatgtaagaagaaatttgctactgtagctactaagaaaaggaataagattaatcagact
aataaaacagcaaatgatgtaaagaagaaacctaggacaaaaccgagacaaaaaatagct
gaaaaaatatcaagaaaacgtatgacagttaaagatgaaaaaggaaatacttgttctgct
gcagaagttaaatttgtgctgaaacaacaagatctgcctgaaattactcataacttttgc
agctcacaaccacttcttactcagaaagatgttcctctgactggctattcaacaggacat
ctaccatcaacacagctcccctcaacagctgatgtacaaggaaattcatcttgctatttt
catccattgctggaaactgataagcctgtggatttacgaggtttgtcttctccaagagaa
aatcttcattcatctgtcatttctgctcctgtgatacctggaagggaaataacaaaaata
aactctcaaaggtctaagagtcaaaatgctgtgtttcgaatgaaggaatctagtttgatt
caaaataatatatttgacccatttaaccactcatctcaggtaacacacaatgtatgtatc
tctaaagataaaacagctacaaagacagaagagattataaattcacagaatagatacttg
tcatcagttggaaaattaaatgaaactcatagctttctagatacaatgaagacagatcag
ttgcataccactaattttttgcattgtaaagacagtaatcagcagcagattgtgtgctta
ccagaagtatcaaaacatgctgatccttattcttctatacttaaatcatctgaggaaggc
catggatctcttcagttgcctaagaactgttttgtaacttctttaaggagtccagtgaaa
cagctaagatgggagcaaaaacagagaggatttatttttgatatgtctcattttaaacct
gaaagaataaaacatcggtctttgtcagaaaccatctcgcaaacaaaaactatctcccag
tgtgaaaacaggactgtaatgaccccatcagcattcagtgaaggacagtctggattagct
gttctaaaagagttactacaaaagagacaacaaaaagcacaacatgcaggtattttgcaa
gagccattatcagtttcacctcagataaagaaaagtatttcttgctctcctgaacagcat
aaagcaagtaaaagatcacagtcagtcacatcaccaagaaagtctcgcactcccagaaat
acaaaacctaaagaaaaaacacccaaacctttaaaagtggcttcatcaaaccagcataac
actactcagagtgaccattttatatctgatgacagccccatctttttttcagacccaggc
tttgaaagctgttattcacttgaagacagcctgtcaccagaccataattacaattttgat
attaataccatagggcagactggattttgtagtttgtattctgcaagtcagtttgtccca
gcagatcaaagtctgccacagaagtttttgagtgatgcagttcaggatctttttcctgga
caaacagcagaaaatgaacttttcagtcataatagccaaaaatctgaggaagaaaaacat
cgctcttcagactcaagtacatggataacatctggtgctctaagtcctgaactatttgag
aaaacctcaatggataacaatgagaaccatcaccatggtcagtggagaaacaatgttcat
ccttcagcatctcgaactagctcatcagtagatattttctgtacgcaacaggcaggggac
tatgtaaatgagaaattcaagttgaatagaaatccagtaaataaagaagtatttcttagc
cttccacagtcaagctgttcagacttcattcaaagctgcactagaaaagaaaccactttt
gaaccatgtcagccacttggttcaattaatacctcttttacttctgtattgtcttctccg
gatggtgagctcatggatgcagcttcggaggatttagagttgtatgtttcaagaaacaat
gaaggattaactccaactccagatagttcacctagatcaaccagttctccctcacagtca
aagaatggaagttttacacctcgtactgctcacattcttaaacctctcatgtccccacca
agtcgtgaagaaatcatggcaactttgctagatcatgaccttgcagaaacaatttaccaa
gaaccattttgcagcaatccgtctgatgcaccagaaaagccaagggagattggaggacgg
cttctcacagtagaaactagacttccaaatgatctgcctgagtttgagggagatttctca
ttggaagggctacgcctctggaagactgcattttcagccatgacacacagtcctagacca
ggttcaccgccacgtaattgtcattccattgctggcaaaggagaaattaatagccataaa
actagcgaagataaaaaaatcgtcatcatgccatgtaaatgcgcaccgagtcgccaacag
gttcagatgtggcttcatgccaaagaagagtatgagcatatcaagaaattgcctaaggct
cagcctgttgacactgagaacgcaacagagaatttcagatccatagcattgcctatagat
cagcctactgaagtggtaaaagcagctaagaatttcagtttacctagcctgcaagacagc
atacctattgtgcctacaaaagatgctcctgtttcacaggcagatcctacaccaacacag
accaaggaaacttgtgataaatatattaatactgtacagatttctacaaataccatagaa
cccagtaaaactccacctgaaagcaggacattgctgcttgctccttcagcaatagaactt
gataaagaagaagaggatgatgattattatgtcaattatagttcaccagattcaccagtg
cttccaccttggcaacaagcagcatccccagattccaaaccatctagtttagaagatgca
gactggcagagtcagaacataatttcatctcctgtgaaagaaaatgacacagcacacagt
gagaatgtacagaaacatgtcagagacgaaggtcgggcatccttcagcacatctccactt
ctggtcagagaaggtgctggaagttctgaatcagtttgcctacatagcacacccattgta
cagagaaaatgtcaagaaagaatagctgaagcacttgattttactcctttatcaacagaa
ccaaagatgcagaaattgaatcatagaagaggaagtaactctgacactcttcgaagagta
cttttaacaacacaagtgaagaatcagtttgctgctctcaatgccccaaagaaagaaact
tctcagattgaaggaccatctttaaacaactcttacggttttaaagtcagtgtgcaaaac
ctgcaggaagcaaaggctttacatgaggtccaaaaccttacactcatcagtatggagtta
catgctcgaaccagacgagacttggagccagaccctgagtttgatcctatctgtgcttta
ttcttctgcatctcatctgacgcagcactgccaaatactgataaaagagaaatcactggt
gctatagtgattgataaagacagaacaatctcaagccaaggtagcagagaccaggcccct
ttgctcacaagatctggaattacaggactagaagtcacttatgctgctgatgagagagct
cttttccaggaagtagtgaatattgtaaaaagatatgacccagatatgatgttaggatat
gaagtccaaatgcattcctggggttacctcttacagagggcggctgcgctaagtgttgat
ttatgccagatgatctctcgtgtaccagatgataagaaagagaacagatttgcagctgag
caagatgaatatgggtcagatacaatgagtgaaataaatattgttggacgaattatgcta
aatctttggagaatgatgagacatgaggtgactctaactaactacacatttgaaaatgtg
ggttttcatgttcttcatcagcgttttcctctatttacctctcgagttttgtctgattgg
tttgacaacaaggcagatatctacagatggaaaatggttgatcactacattagccgtgtc
cgtgggaatctccaaatgttagaacagctggacttgattggtagaaccagtgaaatggca
aggctttttggaattcagttcttgcatgtactaacgagaggttcacagtatcgtgtggag
tcaatgatgctgcgtattgctaaaccaatgaattatatccctgtgacacctagtgtccag
cagcgagctcaaatgaaagccccacagtgtattcccctaataatggagccagagtcccgc
ttctacagtaacactgttcttgtattagatttccagtcattatatccttctattgtgata
gcatacaattactgtttttcaacctgcctgggacatattgagaacttaggaaaatttgat
gagtttaaatttggctgcacatccctcagagtacctcctgatttactttatcagattcgg
catgatatcacagtgtcacccaatggagtggcttttgtcaagccttcagtaagaaagggc
gtgttgccaagaatgttggaagaaattttgaagaccaggataatggtgaagcagtcaata
aaggcctacaagcatgacaaagctatcactcgaatgcttgaggcacgtcagctgggtctt
aaactgatagctaatgtcacatttggttatacttctgctaacttctctggaagaatgcca
tgtatagagattggggatagtattgtccataaagccagagagaccttggagcgagctata
aaactggtgaatgatacgaaaaaatggggagctcgggtcgtatatggcgatactgacagc
atgtttgtactgttgaaaggagccactaaggagcagtctttcaagattggccaagaaatt
gctgaagctgtaacagctaccaacccaaaaccagtaaaactgaaatttgaaaaggtgtat
ttgccttgtgtcttgcaaaccaagaagaggtatgtgggatacatgtatgaaacactggat
caaaaggacccagtatttgatgcaaaaggcatagagacagttcgaagagattcttgtcct
gctgtttccaagatactggagcgttctatcaagctgctatttgaaacacgtgacataagt
cagatcaaacagtatgttcagaatcaatgcatgaaattactagaaggcaaagccagcatg
caagatttcatctttgcgaaggaatacagagggagttccgcttacagacctggagcctgt
gtaccagccctagaaatcacaaggaggatgcttgcatatgaccgtcgttctgagcctcga
gttggggaaagagtaccctatgtcattgtgtatggcatgccaggattacctcttatacaa
ctggtgaggcggcccattgaggtcctacaagataccagcctgaggttgaatgccacgtac
tacatcaccaaacaaattcttccacccctggctagaattttctcgctaattggcatagat
gttttcagctggtatcatgaattgccaaggatccagagagctgcctccactgcccgaacc
gagctggaaggccgaaaaggcacgatctcccagtatttcactaccttacactgtcctgtg
tgtgatgaactgacacagcgtgggatctgtagtaaatgcagaagccagccacagcatgtg
gcagtgattctcagccaagaaatccgagagttggagcgtaagcaggaacaactggtcaag
atatgcaagaactgtacaggttgctttgatcgacagatccagtgtgtttctctgaactgt
ccagtacttttcaagctatccagagtgagccgagagttatcaaaggcaccatatctccga
caactactcgaccagttttaa
DBGET
integrated database retrieval system
