Chelonoidis abingdonii (Abingdon island giant tortoise): 116837308
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Entry
116837308 CDS
T07367
Symbol
CACNA1S
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1S
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
cabi
Chelonoidis abingdonii (Abingdon island giant tortoise)
Pathway
cabi04010
MAPK signaling pathway
cabi04020
Calcium signaling pathway
cabi04260
Cardiac muscle contraction
cabi04261
Adrenergic signaling in cardiomyocytes
cabi04270
Vascular smooth muscle contraction
cabi04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cabi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116837308 (CACNA1S)
04020 Calcium signaling pathway
116837308 (CACNA1S)
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
116837308 (CACNA1S)
09153 Circulatory system
04260 Cardiac muscle contraction
116837308 (CACNA1S)
04261 Adrenergic signaling in cardiomyocytes
116837308 (CACNA1S)
04270 Vascular smooth muscle contraction
116837308 (CACNA1S)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cabi04040
]
116837308 (CACNA1S)
Ion channels [BR:
cabi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116837308 (CACNA1S)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116837308
NCBI-ProteinID:
XP_032657506
Ensembl:
ENSCABG00000016707
LinkDB
All DBs
Position
Unknown
AA seq
1825 aa
AA seq
DB search
MEPASAQDDQKKKQQKEKSKKPVPPAAPRPARALFCLTLQHPLRKACISIVEWKPFEIII
LMTIFANCVALAVYLPMPEDDTNTSNSSLEKIEYVFLIIFTIEATLKIIAYGFLLHTDAY
LRNGWNVLDFAIVSLGLVTVVVEQINVMQGAPLTGKGGFDVKALRAFRVLRPLRLVSGVP
SLQVVLNSIIKAMVPLLHIALLVLFMIIIYAIVGQELFKGKMHKTCYYIGTDVIATGEME
KPSPCASTGHGHHCTMNGTECRSGWPGPNNGITHFDNFGFAMLTVYQCITMEGWTEVLYW
VNDAIGNEWPWIYFVSLILLGSFFVLNLVLGVLSGEFTKEREKAKSRGTFQKLREKQQLE
EDLKGYMDWITHAEVMDSHRARGEGMLPSEEGGSETESLYEIEGMNKWILFFRQWRRWNR
LFRRKCHEVVKSKFFYWLVILLISLNTLSIASEHHWQPEWLTRVQDSANRVLLALFAAEM
LLKMYALGLRQYFMSLFNRFDCFVVCMGILEIILVEINVMSPLGISVLRCIRLLRIFKIT
RYWTSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKYDFEDMEVRRSTFDN
FPQALISVFQILTGEDWNSIMYNGIMAYGGPSFPGVLVCIYFIILFVCGNYILLNVFLAI
AVDNLAEAESLTSAQKAKAEEKKRRKMSRSYPEKSEEEKLLLAKKLEQKAKAEGIPTTAK
LKVDEFESNVNEIKDPYPSADFPGDDEEDEPEIPLSPRPRPLAELQLKEKAVPMPEASAF
FIFSPTNKIRVLCHRIVNATWFTNFILLFILLSSVSLAAEDPIQPESFRNQVLGYFDMGF
TAVFTVEIVLKMTAYGAFLHKGSFCRNYFNILDLLVVAVSLISMGIESSTISVVKILRVL
RVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVIVTTVLQFMFACIGVQLFKGKFSSCTD
PSKMTEKECRGYFIVYLDGSPMQLKLHQREWVHNDFHFDNVLSAMMSLFTVSTFEGWPQL
LYKAIDTHTEDMGPIYNYRVEIAIFFIIYIILIAFFMMNIFVGFVIVTFQEQGESEYKNC
ELDKNQRQCVQYALKARPLRRYIPKNPYQYQIWYVVTSSYFEYLMFFLIMLNTICLGMQH
YNQSAEMNHISDNLNVAFTILFTLEMFLKLMAFKAKGYFGDPWNVFDFLIVIGSIIDVIL
SEIDTFLASSGGLYCLSGGCNGIDSADNTRISITFFRLFRVMRLVKLLSRGEGVWTLLWT
FIKSFQALPYVALLIVMLFFIYAVIGMQMFGKIALVDGTQINRNNNFQTFPQAVLLLFRC
ATGEAWQEILLACSYGKKCDSKSDYAPGEEYTCGTGFAYFYFISFYMLCAFLIINLFVAV
IMDNFDYLTRDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKFC
PHRVACKRLVCMNMPLNSDGTVTFNATLFALVRTALKIKMEGNFEQANEELRAIIKKIWK
RTSMKLLDQVIPPIGEDEVTVGKFYATFLIQEHFRKFMKRQEEYYGYRPKKNTIAIQAGL
RSIEEEAAPEIHRAISGDLTAEEELERAMMEAAIEEGIYRRTGGLFGHVDSFLERNSPLQ
PHVTSQRPLQFTEVGSEDLDSPVFLDDFPPDRNTNANNSNTAARVQYEDELQGERMLPAS
CQPRLYSALGHTRSFRLEKRQRRLDRKRAASVSGCPGWELQLPREEAAAQERVAELSSKC
QLDGGSDTNGEGDAAAATPATTLLIQEALLSDGLSTLACDPSFVTAMRAEMAATCQLEMV
VMEEAAAELLRGRESPEGAEAGSTR
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgcttctgcccaggatgatcagaagaaaaagcaacagaaagaaaagtcaaag
aaaccggtgccaccagcagccccccggccagccagggctctgttctgcttaacccttcag
cacccgctgcggaaagcctgcatcagcattgtggaatggaaacccttcgagatcattatc
ctgatgaccatctttgccaactgtgtggcgttggctgtctacctgcccatgccggaggat
gataccaacacttccaactccagcctggagaagatagaatacgtcttcctgatcatcttt
accattgaagccacactcaagatcatcgcctatgggtttctacttcacacggacgcctac
ctccgaaacggctggaacgtgctggactttgccattgtctctttggggctggtcacggtg
gttgtggagcagatcaatgtgatgcagggtgcaccgctgactgggaaaggcggctttgac
gtcaaagccctgcgagccttccgcgtgctgagacccctgcgcctggtgtcgggagtgcca
agcctgcaggtggtcctgaactctatcatcaaggccatggtgcccctgctccacatcgcc
ctgctggtcctcttcatgatcatcatctacgccatcgtcgggcaggagctgttcaaggga
aagatgcacaagacctgctactacatcgggacagatgtcattgccacaggggaaatggag
aagccatccccatgtgccagcaccggccacgggcatcactgcaccatgaacggcaccgag
tgcaggagcgggtggccagggcccaacaacggcatcacccactttgataattttggcttt
gccatgctgaccgtgtaccagtgcatcaccatggagggatggacggaagtcctctactgg
gtgaacgacgccatcgggaacgagtggccttggatctatttcgtcagcctcattctgctg
ggctctttcttcgttctcaacctggtgctgggcgtgctcagtggggagttcaccaaggag
cgtgagaaggccaagtcacggggcacattccagaaactgcgggagaagcagcagctggag
gaggatctgaagggttacatggactggatcacccatgccgaagttatggatagtcaccgg
gccaggggagaagggatgctgccatcagaggaagggggttcagagacagagagcctgtat
gaaattgagggcatgaacaaatggattctcttcttccggcagtggaggcgatggaaccgc
ctgttccgcaggaagtgccacgaggtggtgaagtccaagtttttctattggctggtgatc
ctgctcatctcgctgaacaccctgtcaatcgcttccgagcatcactggcagcccgagtgg
ctgacccgtgtgcaagacagcgccaaccgggtgctgctggcgctctttgcggccgagatg
ctgctgaagatgtacgcgctgggcctgcgccagtacttcatgtccctcttcaaccgcttc
gactgcttcgtggtgtgcatgggcatcctggagattatcctggtggagatcaacgtcatg
tcgcccttgggcatctccgtcctgcggtgcattcgcctgctgaggatcttcaagataacc
aggtactggacctctctgagcaacctggtggcatccctgctaaactcggtccgctccatc
gcctccctgctcctcctcctcttcctcttcatcatcatcttctccctgctggggatgcag
ctgttcggcgggaagtacgactttgaagacatggaggtgcggcgcagcaccttcgataac
ttcccccaggcactcatcagtgtcttccagatcctgaccggagaagactggaattcaatc
atgtacaatgggatcatggcttatggaggaccctcattccccggcgtgctggtctgcatt
tacttcatcatcctctttgtctgtgggaactatatcctgctcaatgtcttcctggccatc
gctgtggacaatctggctgaggccgagagcctgacgtcagcccagaaagccaaagccgag
gagaagaagcggaggaaaatgtccagaagttacccagagaaatctgaggaggaaaagctc
ctgctggccaagaagttggagcagaaagccaaggccgaaggaatccctaccactgccaag
ttaaaagtggacgagtttgaatcaaacgtaaatgagatcaaagacccctacccttctgct
gacttcccaggtgacgatgaggaagatgagcccgaaatccccctgagccctcggccacgc
cccctggcagagctgcagctcaaggagaaagcagtgcccatgcccgaagccagcgccttc
ttcatcttcagcccaaccaacaagatccgagtgctgtgccaccgaattgtcaacgccacc
tggttcaccaacttcatcctgctcttcatcctgctcagcagtgtctccctggcagctgag
gatcccatccagcctgagtccttcaggaaccaggttctgggatattttgacatgggcttc
accgccgtgttcacagttgaaatagtcctgaagatgactgcatacggtgcattccttcac
aaggggtccttctgccggaactacttcaacatcctggatctgctggtggttgctgtctcc
ctcatctccatgggaattgagtccagcaccatctccgtggtgaaaatcctgagggtgctg
agagtcctgcggccgctgcgggccattaacagagcgaaagggctgaagcacgtagtccag
tgcgtgtttgtggccatcaagaccatcggtaacattgtgattgtcaccaccgtgctgcag
ttcatgttcgcctgcatcggggtgcagctcttcaaggggaagtttagcagctgtacggat
ccgtccaagatgacagaaaaggaatgcaggggctacttcattgtgtacttggacggcagc
cccatgcagctaaagctgcaccagcgtgagtgggtgcacaatgacttccacttcgacaat
gtcctctcagccatgatgtcgctcttcaccgtctccaccttcgagggctggccgcagctg
ctgtacaaggccatcgacacccacaccgaggacatgggccccatctataactaccgggtg
gagattgccatcttcttcatcatctacatcatcctcatcgccttcttcatgatgaacatc
ttcgtcggcttcgtcatcgtcaccttccaggagcagggtgagagcgaatacaagaactgt
gagctggacaagaaccagcgccagtgtgtccagtacgccctgaaagcccgccctctgaga
cgctacatccccaagaacccctatcagtaccagatctggtatgtggtgacctcctcctac
ttcgagtacctcatgttcttcctgatcatgctgaacaccatctgcctgggcatgcagcac
tacaaccagtcagctgagatgaaccacatctcggacaacttgaacgtggccttcaccatc
ctcttcaccctggagatgttcctcaagctcatggccttcaaagccaagggctatttcggc
gacccctggaatgtctttgatttcctcatcgtaatcggtagcatcatcgacgtcatcctg
agcgagatcgatacgtttcttgcttccagtggcggactgtactgcctaagcggaggctgt
aatggcattgattctgcagacaatacccgcatctccatcaccttcttccgacttttccga
gtgatgaggttggtgaagctgttgagccggggggaaggagtctggaccctgctctggacc
ttcatcaagtccttccaggccctgccctacgtggcgttgctgatcgtgatgctgttcttc
atctatgctgtgatcgggatgcagatgtttgggaaaatcgccctggtggatggaacccaa
atcaaccggaacaacaacttccagaccttcccgcaagccgtcctgcttctcttcaggtgt
gcgacaggcgaggcctggcaggagatcttgctggcctgcagctatggaaaaaagtgtgac
tctaagtctgattacgccccaggggaggagtacacctgtggcacgggcttcgcctacttc
tacttcatcagcttctacatgctctgcgccttcctgattatcaacctctttgtcgccgtc
atcatggacaactttgactacctcacgcgggactggtccatcctgggtccgcaccacctg
gacgaattcaaaagaatctgggcagaatacgacccggaagccaagggaaggatcaaacat
ctggatgtggtgaccctgctgagacgcatccagcctcccctgggctttgggaagttctgt
ccgcaccgcgtggcttgcaagcgcctggtgtgcatgaacatgcctctgaacagcgatggc
accgtcaccttcaatgccactctcttcgctctggtgcggacagccctcaagatcaagatg
gaaggtaactttgagcaggccaatgaggagctgagggccattatcaagaagatctggaag
agaactagcatgaaactcttggaccaggtcattccaccaattggagaggatgaggttacc
gtgggcaagttctatgcgaccttcctcatccaggagcactttaggaagttcatgaagcgc
caggaggagtattatgggtatcggcccaaaaagaacaccattgctatccaggccggcctg
agaagcatcgaagaggaagccgcgcccgagatccaccgagcgatctctggagacttgacc
gccgaggaggagctggagagggccatgatggaggcagcgattgaggaagggatatacagg
aggacgggtggcttgttcggtcatgttgattccttcctggagcggaacagccccctgcag
ccccatgtgaccagccagagacccctgcagttcaccgaagtggggagcgaagacttggac
tctcctgtcttcctcgatgacttccccccagacaggaacaccaatgccaacaacagcaac
acagccgcacgggtgcaatacgaggacgagctgcagggggagaggatgttgccagcatct
tgccagccacggctgtactctgccctgggccacacccgctccttccgcctggagaagcgg
cagcggcggctggacaggaaacgggcagccagtgtcagcggatgcccagggtgggagctg
cagctgcccagagaggaggctgctgcccaggagcgggtagcggagctgagctccaagtgc
cagttggatggtggcagtgacacgaacggggagggagacgctgctgccgctaccccagcc
accaccttactcatccaggaggctctgctctccgatggcctcagcactctggcctgtgac
ccatcctttgtgacagctatgagagctgagatggctgccacctgccagctggagatggtg
gtgatggaagaggctgcggctgagctgctgaggggaagggaaagcccagagggagcggag
gccggttccacccgctga
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integrated database retrieval system
