Candidatus Cloacimonas acidaminovorans: CLOAM0537
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Entry
CLOAM0537 CDS
T04769
Name
(GenBank) KH domain/HD domain protein
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
caci
Candidatus Cloacimonas acidaminovorans
Pathway
caci03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caci00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLOAM0537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caci03019
]
CLOAM0537
Messenger RNA biogenesis [BR:
caci03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLOAM0537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
KH_2
Trypco2
Motif
Other DBs
NCBI-ProteinID:
CAO80432
UniProt:
B0VGJ5
LinkDB
All DBs
Position
603980..605548
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AA seq
522 aa
AA seq
DB search
MTINPIIALIIGVAGGFAIALIIYFIKRNTAFKLISQSTKIAEELEKNAKIEAENAKKAA
LLEAREEWIKQKRLLDEEIKERQKELRLEEKKYNERLSSLDKRLDSLDKKETALAEQEKK
LRNKEEELLNKKNEFDAIIVEQKNKLAEIAGLSREEAIARLREELISQARQVAANDARLT
IEQIKLDANRKAAEILSTAIQRMAVDYVSETTVSVVSLPSDEMKGRIIGREGRNIRTFEK
VSGVDLIIDDTPEAVVLSCFDPVRREVARLALEKLIADGRIHPGRIEEIIAKTAKEMEEN
LVKIGEKAVLETNIHNISPNLIKVLGRLHYRTSYGQNVLEHSIESAWICGILAAELGLDQ
ELARRAGLLHDIGKAIDHEFDGSHAIIGANLARKNGEGKIIVNAIEAHHEEVEAISVYAA
LTQASDAISGARPGARREMLETYMQRLSKLEEIANSIDGVSKSYAIQAGRELRIIVEPSL
IDENQTALLATEIAASIEKQVQYPGQIKVTVIRETRQIAMAK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgactataaatcctattatagcactcatcataggagtggcaggcggttttgccattgct
cttattatatatttcataaagcgtaatactgcttttaaactgatttcgcaatcaactaaa
attgccgaagagttagaaaagaacgctaaaattgaagccgaaaatgctaaaaaagcagct
ctactggaagcacgcgaagaatggattaaacaaaaacggcttctggatgaggaaattaaa
gaacgccaaaaagaactgcggctggaagaaaaaaaatacaatgagcgtttaagcagttta
gataaacgcctggactctctggataaaaaagaaactgcccttgcggaacaggaaaaaaaa
ttaagaaacaaagaagaagaactgctcaataagaaaaatgaatttgatgctatcattgtt
gaacaaaaaaataagctggccgaaattgcagggctcagtcgtgaagaagcaattgcccgt
ttgcgggaagaattaatttcgcaggcaaggcaggttgcggcaaatgatgcccggcttact
attgaacaaataaaactggatgccaacagaaaagctgcagaaattctttccactgctatt
caacggatggcagtagattatgtatccgaaacaaccgtctctgttgtatcgcttccttcc
gatgaaatgaagggaagaataattggcagggaaggaagaaatatccgcacttttgaaaag
gtctccggagtggacttaattattgatgatactcccgaggcagttgtgctcagctgtttt
gatcctgtccgtcgtgaagtagccagattagctttggaaaaacttattgccgatggtaga
attcatcctggtcgcattgaagaaataatagccaaaacagctaaagaaatggaagagaat
ttggttaagattggagaaaaagcagttctggaaaccaatatacacaatatttcaccgaac
ctcattaaggttttggggcgtttgcattaccgaaccagctacggacaaaatgttttagag
cactcaatagagtccgcttggatttgtggaattttagctgctgaactgggtctggatcaa
gaacttgctcgtagagcaggtttattgcatgatataggaaaagctatagaccacgaattt
gacggttcccacgccattattggagccaatttggcacgcaaaaacggtgagggaaaaata
attgtgaatgctattgaagctcaccatgaagaagtggaggcaatttctgtttatgccgct
ttaactcaagcatcggatgctatttctggtgcccgaccaggtgcccgaagagaaatgttg
gaaacctatatgcagagattatccaaactggaagaaatagccaatagtatagatggagta
agtaaatcgtatgccattcaggcaggcagggaattacggataattgtagagccgtctttg
attgatgaaaatcaaactgctttattggcaactgaaattgccgcttctattgagaaacag
gttcagtatcctggtcaaattaaagttacggttatcagagaaacacgccagatagcaatg
gcaaagtaa
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