Collinsella aerofaciens: CSV91_05335
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Entry
CSV91_05335 CDS
T05143
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
caer
Collinsella aerofaciens
Pathway
caer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
caer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSV91_05335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caer03021
]
CSV91_05335
03400 DNA repair and recombination proteins [BR:
caer03400
]
CSV91_05335
Enzymes [BR:
caer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSV91_05335
Transcription machinery [BR:
caer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSV91_05335
DNA repair and recombination proteins [BR:
caer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSV91_05335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ATP54012
UniProt:
A0A2D1TXC0
LinkDB
All DBs
Position
complement(1209668..1213162)
Genome browser
AA seq
1164 aa
AA seq
DB search
MVTYAYTATERKRVSFGKIPEAMELPNLISVQRESFERFKDEGLREAFKESSPIQSQNHV
LEVTFGEHQFGDPAHTVEECREKDMTYQAPLLTDVRLTNKETGEIKEQLVFMGDFPMMTD
QGTFIINGTERIVVSQLVRSPGVYYSSEMDSGKQIYKAQIIPSRGAWLEFEVDKRDQLMV
SIDRKRKQSATMFLRALGIAVTNDDIIELLGNSDVIKRTLERDTALTREDALIEIYRRLR
PGEPPTVDASRSLLEGLLFNPQRYDLARVGRYKVNKKLNLTTEEEVTVLTDEDIVATLRY
LLSLAAGEQGFKVDDIDHFGNRRIRTVGELVANQFRIGMSRMERVVRERMSSQDIDEITP
QSLINIRPIVASIKEFFGSSQLSQFMDQANPLTGLTHKRRLSALGPGGLAGHKSGSSRRT
NVPTAVRDVHNSHYSRMCPIETPEGPNIGLIGSLALYARVNEYGFIEAPFRRVENGVATD
QIDWMTADEEEKHVIAPANTPLDPKTNEFITTDAEGKLVRPHTVIARTRDFDGSFGAPAD
VPVEDVDYMDVSPRQMLSVAATLIPFLEHDDAKRTLMGANMQRQAVPLVHPAAPYVGTGM
ERRAALDSGEVTLAKNAGEVIFADAAKIIVKHAGGMDEYHLAKYQRSNQSTCINHRPLVR
VGDTVEQGEPLADGPSTDHGELALGQNLTVAYMPWEGFNYEDGIVVSERLVAEDLLTTIN
ITRHEIDARDTKLGPEEITREIPNLSEDMLANLDEDGIIRIGAEVGPGDILVGKVTPKGE
SALTAEERLLRAIFGAKAHDVRDTSLKMPHGAYGRVIDVVRFSRENGDDLAPGVNEQVRV
YVAQRRKIQQGDKIAGRHGNKGVICNVLPVEDMPYMADGTPIDVILNPLGVPSRMNVGQL
LECHLGWAAACGWDTEKADSDKYVPGPFFTATPVFDGAKEDEIAEVIRRANKNMLNKATA
AFGDHMRPEFVTQLDERGKTRLFDGRTGEEFREPITVGTSYILKLGHMVDDKIHARSTGP
YSLVTQQPLGGKAQFGGQRFGEMEVWALYAYGASNVLQEILTVKSDDTVGRVKTYESIVK
GENVPVPGIPESFKVLVKEIRSLALDIEPMHDADEDASAPVTAEETSALDDLAALAGVDA
DVEAEDAETVEAPEAVAATTTDKE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
ctggtgacctacgcatacactgccactgagcgcaagcgcgtcagcttcgggaaaatcccg
gaggccatggagctccccaaccttatctctgttcaaagggaatcctttgagcgttttaag
gacgagggccttcgtgaggcgttcaaggaatccagccccatccagagtcagaaccatgtt
ctcgaggttaccttcggcgagcatcagttcggcgaccccgcgcacaccgtcgaggagtgc
cgcgagaaggatatgacctatcaggctccgcttctgaccgacgtccgtctcaccaacaag
gagaccggcgagatcaaggagcagctcgtctttatgggcgacttccccatgatgaccgat
cagggcaccttcatcatcaacggtaccgagcgtatcgtcgtttcgcagctcgtccgttcc
ccgggtgtgtactacagctccgagatggattcgggcaagcagatctacaaggcccagatc
atcccgtcccgcggtgcctggctcgagtttgaggtcgacaagcgcgatcagctcatggtc
tccatcgaccgtaagcgtaagcagagcgccacgatgttcctgcgcgcccttggcatcgcc
gtcaccaacgacgacatcatcgagctgctcggcaactccgatgtgatcaagcgcaccctg
gagcgcgacaccgccctcacccgcgaggatgcccttatcgagatctaccgtcgcctgcgc
ccgggcgagcctcccaccgtggacgcttcccgcagcctgctcgagggcctgctctttaac
ccgcagcgctacgatctggcccgcgtcggtcgttacaaggtcaacaagaagctcaacctc
accaccgaggaagaggtcacggtgctcaccgacgaggatatcgtcgcgacgctgcgctac
ctgctgtccctcgctgccggcgagcagggcttcaaggtcgacgacatcgaccactttggc
aaccgccgcatccgcaccgtcggcgagctcgtcgccaaccagttccgtatcggcatgagc
cgtatggagcgcgtcgtccgtgagcgcatgagctcccaggacatcgacgagattaccccg
cagtcgctcatcaacatccgtccgatcgtggcctccatcaaggagttcttcggttcctcg
cagctctcgcagttcatggaccaggcgaaccccctgaccggtctgacccacaagcgccgt
ctgtccgcactcggccctggcggtcttgccggccacaagtccggctccagccgccgcacc
aacgtgccgacggccgtccgcgacgttcacaactcgcactacagccgcatgtgcccgatc
gagacccccgaaggccccaacatcggcctgatcggctcgctcgctctctacgcccgcgtc
aacgagtacggcttcatcgaggctccgttccgtcgcgtcgagaacggcgttgccaccgac
cagatcgactggatgaccgctgacgaggaagagaagcacgtcatcgcgccggccaacacg
ccgctcgatcccaagaccaacgagttcatcacgaccgatgccgagggcaagcttgtccgc
ccgcacaccgtgatcgcccgtacccgcgacttcgacggctccttcggcgctcccgccgac
gtgcctgtcgaggacgtcgactacatggacgtctcgccgcgtcagatgctctccgtcgca
gccacgctgatcccgttcctcgagcacgacgacgccaagcgtacgctgatgggcgctaac
atgcagcgccaggccgtgccgctggttcaccctgccgctccctatgtcggtaccggcatg
gagcgtcgcgccgctctggactccggcgaggtcaccctggccaagaacgccggcgaggtc
atctttgccgacgctgccaagatcatcgtcaagcatgccggcggcatggacgagtatcac
ctggccaagtaccagcgctccaaccagtccacctgcatcaaccaccgtccgctcgtgcgc
gtcggtgacaccgttgagcagggcgagcccctggctgacggtccttcgaccgatcatggc
gagctcgcactgggtcagaacctcaccgtggcatacatgccgtgggaaggcttcaactac
gaggacggtatcgtcgtgtccgagcgtctggtggccgaggacctgctgacgaccatcaac
atcacccgtcacgagatcgatgcccgcgacaccaagctcggccccgaggagatcacccgc
gagatcccgaacctctctgaggatatgcttgccaacctcgacgaggacggcattatccgc
atcggcgccgaggtcggccctggcgacatcctggtcggcaaggtcacgcctaagggcgag
agcgctctgaccgccgaggagcgcctgctgcgcgccatcttcggtgccaaggcccacgac
gtccgcgacacctcccttaagatgcctcacggcgcttacggtcgcgtcatcgacgtcgtc
cgctttagccgcgagaacggcgacgatctggcccccggcgtcaacgagcaggtgcgcgtc
tacgtcgcccagcgtcgtaagatccagcagggcgataagatcgccggccgccacggcaac
aagggtgttatctgtaacgttctgccggtcgaggacatgccctacatggctgacggtacc
ccgatcgacgttatcctcaacccgctgggcgttccctcgcgtatgaacgtcggccagctg
ctcgagtgccaccttggctgggccgctgcctgcggttgggataccgagaaggccgactcc
gacaagtacgtccccggtccgttcttcaccgcgacgcccgtcttcgacggcgccaaggag
gacgagatcgccgaggtcattcgtcgtgccaacaagaacatgctcaacaaggccaccgct
gcctttggcgatcacatgcgtcccgagttcgtcacccagcttgacgagcgcggcaagacc
cgcctgttcgacggccgcaccggcgaggagttccgcgagcccattaccgtgggtacgtcc
tacatcctcaagctcggccacatggtcgacgacaagatccacgcccgttcgaccggccct
tacagcttggttacccagcagcctctgggcggcaaggcccagttcggcggccagcgcttc
ggcgagatggaagtttgggcactgtacgcatacggtgcttccaacgtcctgcaggagatt
ctgaccgtcaagtccgacgataccgtgggccgcgtcaagacctacgagtccatcgtcaag
ggcgagaacgttcctgttccgggtatccccgagtccttcaaggttctcgtcaaggagatc
cgttccctcgcgctggacatcgagcccatgcacgatgctgacgaggacgcctccgcccct
gtgaccgccgaggagacctctgctctcgacgacctggctgcgctcgccggcgttgacgcc
gacgtcgaggccgaggatgccgagaccgtcgaggcacccgaggctgtcgccgccacgacc
actgataaggagtag
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integrated database retrieval system
