Chloroflexus aggregans: Cagg_3711
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Entry
Cagg_3711 CDS
T00824
Name
(GenBank) RNA binding metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cag
Chloroflexus aggregans
Pathway
cag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cagg_3711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cag03019
]
Cagg_3711
Messenger RNA biogenesis [BR:
cag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cagg_3711
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_NusA_2nd
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ACL26547
UniProt:
B8GAH2
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All DBs
Position
4509636..4511168
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AA seq
510 aa
AA seq
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MTELLWAVIALLLGLVGGAGIGIWWANNGASSLVQRKAAEARLLIEEARSQQKEILLQAK
DEALRIRNEAEAELRESRQSLQKQEERLQRKEENIDRKLEGIERRERLIQQRERQIEQLA
QEAERLKRQQAQELERISQLSRDEARSIILAEVERETREDAARRIRELEQQTKEEADKIA
RKIIGLAIQRCASDYVAEMTVSTVNLPSEELKGRIIGREGRNIRAFEQITGVDIIVDDTP
EAVTLSCHDPVRREVARVALLKLLKDGRIHPSRIEEVVHKTQLEIEQIMREEGERVAYEA
NVQGLHPDLIKLLGRLKYRTSYGQNVLQHSLECALLAAHMAAELGANVNIAKTAALLHDI
GKAVDHEVQGPHALIGAEIARRLGRSPAIVHAIAAHHYDEEPQTVEAFLVIAADAISGAR
PGARRETLDLYIKRLEALETVATSFPGVQRAFAVQAGREVRVMVQPDQIDDLGSIHLARN
VAKKIEESLQYPGQIKVTIIRETRAVDYAR
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtgacagagctactctgggccgtcattgccctcttactcgggctagttggcggtgcaggc
ataggtatctggtgggcaaacaatggcgctagctcactagtccaacgcaaagctgctgaa
gcgcgactattaatcgaagaggcgcggtcgcagcaaaaagagatacttttgcaagccaaa
gatgaggcattacggattcgtaatgaagccgaagccgagttacgtgaatcgcgccaaagc
ttgcaaaaacaagaagaacggctgcaacgtaaagaggaaaatatcgatcgcaagctcgag
gggatcgaacgccgcgagcggttgatccagcagcgcgagcgccaaatcgaacagttggca
caagaagctgagcggctcaaacgacaacaagcgcaagaacttgagcgcatttctcagttg
tcacgtgacgaagcgcgttcaattattttagccgaagtagaacgcgaaacccgtgaagat
gctgctcggcgcatccgtgaactcgaacagcagaccaaagaagaagccgataagattgca
cgcaaaattatcggtttggccatccaacgctgtgcgagtgattacgttgcagaaatgacc
gtctcaacggtgaatctgccgagtgaagaattgaaaggacgcattatcggtcgtgaaggc
cgcaatattcgtgcctttgagcagatcaccggtgttgatatcattgttgacgatacgccc
gaagcagtgacgctctcgtgtcatgatccggtacgtcgcgaagtggcacgggtagcgctg
ctcaagttgctgaaagatggtcgtatccatccgtcacgcatcgaggaggtggtccacaag
acgcagcttgagatcgaacagattatgcgtgaagagggtgagcgcgttgcctacgaagca
aacgtgcaagggttgcaccccgatctgatcaagctgctcggtcggttgaagtatcgtact
agttatgggcaaaatgtgttacagcattcacttgaatgtgccttattggcggcgcacatg
gctgccgaattaggggcgaatgtgaatattgcgaagacggcggcactcctgcacgacatc
ggtaaggcagtcgatcatgaagtgcagggtcctcatgctctgatcggagcggagattgcg
cgccggttgggccggtcaccggccattgtgcatgcaatagctgcccatcactatgacgag
gagccacaaacggttgaagcatttctggtgattgcagccgatgcgatctccggcgcacgg
cccggtgcgcgtcgtgagacgctcgatctctatatcaaacggcttgaagcactagagacg
gtagcaacctcattccccggtgtccaacgggcatttgccgttcaagccggtcgtgaggtg
cgtgtcatggtgcagcccgatcaaatcgatgatctgggtagcatccatctggctcgcaat
gtggcaaagaagattgaagagagtttgcagtatccgggccagatcaaagtaacgatcatc
cgtgaaacccgcgcggtcgattatgcgcggtga
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