Costertonia aggregata: HYG79_14535
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Entry
HYG79_14535 CDS
T06693
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
cagg
Costertonia aggregata
Pathway
cagg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HYG79_14535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cagg03400
]
HYG79_14535
DNA repair and recombination proteins [BR:
cagg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HYG79_14535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Lipoprotein_11
Motif
Other DBs
NCBI-ProteinID:
QLG46512
UniProt:
A0A7H9AT41
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All DBs
Position
complement(3156412..3157182)
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AA seq
256 aa
AA seq
DB search
MRSVWNGSISFGLVSIPIKLFSGSEERALDLDMLDCHDGQRIRYKRVNEKTGKEVEWKDI
VKGYKKDEEYIILEKEDFANANMKKSKTIDIEQFVMADEVADVLFKKPYFIKPQKDGGKA
YALLRNALKKTEKLGVATFVMRQKEHLSLIGVYEDALVLHIIRFEDEIRNTAELELPKTK
VAKKELDMAVSLIDQYTEEFDFSKFKDVYNEQLLKIIEAKASGKIAKPKKFEAKPTQAKD
LMAQLKASLEKRKKAS
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgagatcagtttggaacggttcgataagttttggccttgtatcgatacccataaaatta
ttttcggggtcggaagagcgggccttggacctcgatatgctggattgtcacgatgggcag
cgcattcggtacaaacgggtcaatgagaaaaccggtaaggaagtcgaatggaaggatatt
gtcaaaggatacaagaaagatgaagaatatatcattctggaaaaagaggatttcgccaac
gccaacatgaagaagagtaaaaccatcgatatcgagcaattcgtgatggccgatgaggtt
gccgatgtgctttttaaaaaaccctatttcatcaaaccgcaaaaagatggtggcaaggcc
tatgccctgttgagaaacgcactcaaaaaaacagaaaagctgggcgtagcgacctttgtg
atgcgccaaaaagagcatctttcattgattggggtctatgaggacgcccttgtgctacac
attattcgctttgaggatgaaatcaggaataccgccgaactggaactaccaaaaaccaaa
gtcgccaaaaaagaactggacatggccgtatccttaatcgaccaatataccgaggaattc
gacttttcaaagttcaaggatgtttataacgaacaacttctaaaaatcatcgaggcgaag
gcatccggaaaaatcgccaagcccaaaaaattcgaagcgaaacctactcaggccaaagat
ttaatggcacaactcaaggcaagtttggaaaaaaggaaaaaagcttcgtag
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