Calothrix sp. NIES-2098: NIES2098_57230
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Entry
NIES2098_57230 CDS
T08374
Name
(GenBank) ribulose bisphosphate carboxylase small chain
KO
K08698
carbon dioxide concentrating mechanism protein CcmM
Organism
caln
Calothrix sp. NIES-2098
Brite
KEGG Orthology (KO) [BR:
caln00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99981 Carbohydrate metabolism
NIES2098_57230
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_small
Hexapep
GSG-1
GMPPB_C
Hexapep_2
LbH_EIF2B
Motif
Other DBs
NCBI-ProteinID:
BAY12535
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Position
6903731..6905380
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AA seq
549 aa
AA seq
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MAVSNTVAPPTPWSRTLAEPTIHKTTFVHSFSNVIGDVRIGANVIVAPGTSIRADEGTPF
FIGENTNIQDGVVIHGLEQGRVIGDDQEHYSVWIGKNASITHMALIHGPAYVGDNSFIGF
RSTVFNARVGAGCIVMMHALIQDVEIPPGKYVPSGAIITNQQQADRLPDVQAQDQEFTHH
VVGINQALRAGYLCVADSKCIAPIRDELKKSSTSNGITVLELERSSEVASGSLSAETIEQ
VRYLLEQGYKIGTEHVDQRRFRTGSWTSCKPLDARSVGEAIAALESCVRDHSGEYVRLFG
IDKNKRRVLETIIQRPDGTVSAPSNFRAPAAQSNGSYRAHTNGNSNGYGSGQLSAETVEQ
IRQLLAGGYKIGTEHVDERRFRTGSWQSCQPISSTSTNDVIAALQDCINNHQGEYVRLIG
IDPKAKRRVLESIIQRPNGQVSPSSSQKSFASAPTATAQATSTRLSGEVVDQLRQLLASG
YKISVEHVDQRRFRTGSWTSSGPIQANSEREAIAALEAHLAEYQGEYVRLIGIDPKAKRR
VLETIIQRP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcagcaacacggtggctcccccaaccccgtggtctagaaccttagctgagcca
acaatccataaaaccacatttgtacattcgttttccaatgtgattggagatgtgcgtata
ggtgcaaatgttatcgttgctcccggaacatcaattagagccgatgaaggtacgcctttc
ttcattggtgaaaacactaatattcaagatggtgtagttattcatgggttggagcaaggt
cgagtaattggtgatgaccaagagcattactcggtatggataggtaaaaatgcttccatt
acccacatggccctgattcacgggcccgcttatgttggggataattcatttattggtttt
cgctctacggtatttaatgccagggtgggtgcaggctgcattgtgatgatgcacgctttg
attcaagatgtagaaattccccctggtaagtatgtaccgtcgggagccatcattactaat
cagcagcaagctgaccgcttaccagatgtacaagcgcaggatcaagaattcacccatcat
gtagtgggaattaatcaggcactacgtgcgggttatctgtgtgtggcggatagtaaatgt
attgcacccattcgggatgaattaaaaaaatcttctacaagtaatggcattactgtttta
gagctagaaaggagtagtgaagtggcaagcggcagtttgagcgcagaaactattgagcag
gtgcgctatttattggagcagggatataaaattggtacggaacacgtagaccaaagacgc
ttccgtactggttcttggactagttgtaaacctctggatgctagatcggttggggaagcg
atcgcagctttagaaagttgtgtgagagaccacagcggcgagtatgtgcggttgtttggt
atcgataaaaataaacggcgcgtgttagaaaccatcatccaacgtcccgatggtacagtt
tccgcacctagcaactttagagcgcctgctgctcagtctaatggtagctacagagctcat
actaacggtaacagtaacggttatggtagcggacaactcagtgctgaaaccgtagaacaa
atccgccaactcttggcaggtggttacaaaatcggtacagaacacgtagatgagcgacgc
ttccgcacaggttcttggcaaagttgtcagccaattagctccacttctaccaatgatgtg
attgctgccttacaagattgtatcaacaaccatcaaggcgaatatgtgcgcttgattggt
attgacccgaaagccaagcgtcgggtattggaaagtattatccaacgtcctaacggtcag
gttagtccatctagcagccagaaatcatttgctagtgcgccaacagcaaccgcacaagca
actagcacccgcttgagtggtgaagtcgtagaccagttacggcaattactggcaagtggg
tataagattagcgttgaacacgtagaccaaagacgcttccgtacaggttcctggacaagc
agcggcccgattcaagccaattcggaaagagaagcgatcgcggctttagaagcacacctg
gctgaatatcaaggcgaatacgtgcgcttaatcggcattgacccgaaagccaagcgtcgg
gtattggaaaccattattcagcgcccatag
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