Citrobacter amalonaticus Y19: F384_20205
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Entry
F384_20205 CDS
T03934
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cama
Citrobacter amalonaticus Y19
Brite
KEGG Orthology (KO) [BR:
cama00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cama03032
]
F384_20205 (gyrB)
03400 DNA repair and recombination proteins [BR:
cama03400
]
F384_20205 (gyrB)
Enzymes [BR:
cama01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F384_20205 (gyrB)
DNA replication proteins [BR:
cama03032
]
Prokaryotic type
DNA Topoisomerases
F384_20205 (gyrB)
DNA repair and recombination proteins [BR:
cama03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F384_20205 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AKE60721
UniProt:
A0A0F6TY18
LinkDB
All DBs
Position
complement(4374655..4377069)
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AA seq
804 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDII
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVIQRDNKIHRQIYEHGVPQAPLAVTGDTDKTGTMVRFWPSYETFTNVI
EFEYEILAKRLRELSFLNSGVSIRLKDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVEQQMNELLSEY
LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPAHSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQLSIALDGATLHTTEGAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEANLSDEQTVTRWVNTLITELNEKEQHGSQWRFDIQHNTEQNLF
EPIVRVRTHGVDTDYVLDHEFVTGAEYRRICTLGEKLRGLIEEDAFIERGERRQPVTSFE
QALDWLVKESRRGLAIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
MGDAVEPRRAFIEENALKAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaaggactggatgcggtgcgt
aagcgcccgggtatgtatatcggcgatacggatgacggcaccggtttgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagacattatt
gtcaccatccatgccgacaactctgtctccgtacaggatgatggacgcggtatcccgacc
ggtattcacccggaagagggcgtatcggcggcggaagtgatcatgaccgttctgcacgca
ggcggtaaattcgacgataactcctataaagtgtccggcggtctgcacggcgtgggtgtc
tccgtagtgaacgccctgtcgcagaaactggaactggttatccagcgtgataacaaaatc
caccgtcagatctacgagcacggcgtcccgcaggcaccgctggcagtgaccggcgatacc
gataaaaccggtacgatggtgcgtttctggccgagctatgaaacctttactaacgtcatt
gagttcgaatacgagattctggcgaagcgtctgcgcgagctgtcgttcctgaactctggc
gtctccattcgcctgaaagacaagcgcgatggtaaagaagaccatttccactatgaaggc
ggcatcaaggcgttcgttgagtatctgaacaagaacaaaacgccgatccacccgaatatc
ttctatttctctaccgaaaaagacggtatcggcgtggaagtggcgctgcagtggaacgac
ggtttccaggaaaacatctactgctttaccaacaacattcctcagcgtgacggcggtacg
caccttgctggcttccgtgcggcgatgacccgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaggcgaaagtcagcgccaccggtgatgacgcccgtgaaggtctgatt
gccgtggtgtctgtgaaggtgccggatccgaaattctcctctcagaccaaagataaactg
gtctcctctgaggtgaaaacggcggtagaacagcagatgaatgaactgctgagcgaatac
ctgctggaaaacccgtccgacgccaaaatcgtggtcggcaaaattattgatgcggcccgt
gcccgtgaagcggctcgtcgcgcgcgtgaaatgacgcgtcgtaaaggggcgctggatctg
gcgggtctgccgggcaagctggcggactgtcaggaacgcgacccggcgcattctgaactg
tacctggtggaaggggactcggcgggcggctctgcgaaacaggggcgtaaccgtaagaac
caggcgattttgccgctgaaaggtaaaatcctcaacgttgagaaagcgcgttttgacaag
atgctggcctcacaggaagtcgcaacgcttatcactgcactgggctgcggcattggtcgc
gatgagtacaacccggacaaactgcgctatcacagcatcatcatcatgactgatgcggac
gtcgacggctcgcacatccgtacgctgctgttgaccttcttctatcgccagatgccggaa
atcgttgagcgtgggcatgtgtatatcgcgcagccgccgctgtataaagtgaaaaaaggc
aagcaagagcagtacatcaaagacgatgaagcgatggatcagtaccagctttctattgct
ctggacggtgctacgctgcacaccactgaaggggcgccagccctgtcgggtgaagcgctg
gaaaaactggtttctgagtacaacgcgacgcagaagatgattggtcgcatggagcgtcgc
ttcccgaaagcgctgctgaaagagttggtttatcaaccaactctgaccgaagccaacctg
tctgacgagcagaccgtgacccgttgggtgaacacgctgattaccgagctgaacgagaaa
gaacagcacggcagccagtggaggttcgatatccagcacaatacggaacagaatctgttt
gagccgatcgttcgcgtgcgtacccacggtgtggacaccgactacgtgctggatcacgag
tttgtgaccggtgcggaataccgtcgtatttgcacgctgggcgagaaactgcgcggcctg
atcgaagaagacgctttcatcgaacgtggcgaacgtcgtcaaccggttaccagcttcgag
caggcgctggactggctggtgaaagagtcgcgtcgcggcctcgctatccagcgttataaa
ggtctgggcgagatgaacccggatcagctgtgggaaaccacgatggatccggaaagtcgt
cgtatgctgcgcgttaccgtgaaggatgcgattgccgccgaccagttgttcaccacgcta
atgggcgacgccgttgaaccgcgtcgtgcatttatcgaagagaacgccctgaaagcggcg
aatatcgatatttaa
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