Cobetia amphilecti: LCW13_05455
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Entry
LCW13_05455 CDS
T07922
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
camh
Cobetia amphilecti
Pathway
camh02024
Quorum sensing
camh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
camh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LCW13_05455 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LCW13_05455 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
camh03019
]
LCW13_05455 (hfq)
03036 Chromosome and associated proteins [BR:
camh03036
]
LCW13_05455 (hfq)
Messenger RNA biogenesis [BR:
camh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LCW13_05455 (hfq)
Chromosome and associated proteins [BR:
camh03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LCW13_05455 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
UBU49704
LinkDB
All DBs
Position
1285830..1286078
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AA seq
82 aa
AA seq
DB search
MSKGQSLQDPYLNILRKERIPVSIFLVNGIKLQGQIESFDQFVILLRNTVSQMVYKHAIS
TVVPSRNVRLPAQDPSVPSTES
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaggtcaatcactccaggacccgtacctgaacatcctgcgcaaggaacgtatc
ccggtctcgatcttcctggtcaacggcatcaagctgcagggccagatcgaatccttcgat
cagttcgtgatcctgctgcgcaatactgtctcccagatggtttacaagcacgctatctcg
accgtggtgccgtcgcgcaatgtgcgcctgccggcccaggatccgagcgtgccgtccaca
gaaagctga
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