Campylobacter sp. RM6137: CSUIS_0838
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Entry
CSUIS_0838 CDS
T05900
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
camy
Campylobacter sp. RM6137
Pathway
camy02020
Two-component system
camy02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
camy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSUIS_0838 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSUIS_0838 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
camy03021
]
CSUIS_0838 (rpoN)
Transcription machinery [BR:
camy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSUIS_0838 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_38
HTH_23
MS_C
KorB
HTH_IclR
HTH_5
Calici_PP_N
MarR
Motif
Other DBs
NCBI-ProteinID:
ARR00653
UniProt:
A0A1X9SWR6
LinkDB
All DBs
Position
822502..823740
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AA seq
412 aa
AA seq
DB search
MKLSQKLTAKTKLNQTLRSWLPILQASGDELKETLEPFLEKNPFAQLEPNPKSRSINFYN
DLYKTSISDAIESNIIYKESLYEKLYNQIDDRLFPSQKSKEIANLIIESISDEGYFEWSD
EKFANFSKEEVERVRARFAYLEPIGVGAVDYKESFIFQLNDLCDDDEIYRLCVEIIENFE
NISKFTKRKNYDAAMSIIKKFKNPPAIEYMDSDILVIPDIFVYDNDGAIEVAVNDEFYPH
INIDIDGVDEKSEFVSSKIKEAKDLIDALEMRKSTLYKIGLMIIEYQYDYFFGGDIKPMK
LKDIADDLGRNPSTISRAIQNKFLSSKRGIVPLKNFFTAAAAKEVSNAAIKEFLLNLIKN
ENRLKPLSDEAILAMIESEFDIKLVRRTITKYRKMLNIASSSERKKLYAIQG
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctctcaaaagctcaccgctaaaactaaattaaatcaaactcttcgcagctgg
ttgcctattttacaagcttctggtgatgagctaaaggagactttagagccatttttagaa
aaaaacccatttgctcagctagagccaaatccaaaaagtagatctattaatttttataac
gatctatataaaactagcataagtgatgcgatagaatcaaacataatttataaagagagc
ctttatgaaaagctatataatcaaatcgatgatagattgtttccttctcaaaagtccaaa
gagatagcaaatttgattattgagtctattagtgatgagggctattttgagtggagtgat
gagaaatttgctaattttagcaaggaggaagttgagagagttcgtgctagatttgcctat
ttagagcctattggagttggggctgtggattataaggagagttttatatttcagcttaat
gatctatgcgatgatgatgagatatataggctttgtgttgagattatagaaaattttgaa
aatatcagtaaatttacaaaacgcaaaaattatgacgccgctatgagtataataaaaaaa
ttcaaaaaccccccggcaatagagtatatggatagtgatatattagttattcctgatatt
tttgtttatgataatgatggtgcgatagaggtggctgtaaatgatgaattttatccacat
attaatattgatatagatggagttgatgaaaaaagcgagtttgtatctagtaaaatcaaa
gaggcaaaggatctaatcgatgcattagagatgcgtaaatccacgctttataagattggt
ttaatgataatagaatatcaatatgactacttctttggtggagatataaagcctatgaag
ctaaaagatatcgctgatgatttaggcagaaatccatctactattagccgtgcgatacaa
aataaatttctaagctccaaacgaggaattgtcccactaaaaaatttctttacagcagca
gcggcaaaagaggtatcaaatgccgctattaaggagtttttgctaaacttaattaagaat
gaaaatagattaaagcctttaagcgatgaggcgattttggctatgattgagagtgaattt
gatataaaattagtccgcagaactataaccaaatatcgtaaaatgctaaatattgctagc
tcaagtgagcgtaaaaaattatacgcaattcaaggctaa
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