KEGG   Campylobacter sp. RM6137: CSUIS_0838
Entry
CSUIS_0838        CDS       T05900                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
camy  Campylobacter sp. RM6137
Pathway
camy02020  Two-component system
camy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:camy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CSUIS_0838 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CSUIS_0838 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:camy03021]
    CSUIS_0838 (rpoN)
Transcription machinery [BR:camy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CSUIS_0838 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_38 HTH_23 MS_C KorB HTH_IclR HTH_5 Calici_PP_N MarR
Other DBs
NCBI-ProteinID: ARR00653
UniProt: A0A1X9SWR6
LinkDB
Position
822502..823740
AA seq 412 aa
MKLSQKLTAKTKLNQTLRSWLPILQASGDELKETLEPFLEKNPFAQLEPNPKSRSINFYN
DLYKTSISDAIESNIIYKESLYEKLYNQIDDRLFPSQKSKEIANLIIESISDEGYFEWSD
EKFANFSKEEVERVRARFAYLEPIGVGAVDYKESFIFQLNDLCDDDEIYRLCVEIIENFE
NISKFTKRKNYDAAMSIIKKFKNPPAIEYMDSDILVIPDIFVYDNDGAIEVAVNDEFYPH
INIDIDGVDEKSEFVSSKIKEAKDLIDALEMRKSTLYKIGLMIIEYQYDYFFGGDIKPMK
LKDIADDLGRNPSTISRAIQNKFLSSKRGIVPLKNFFTAAAAKEVSNAAIKEFLLNLIKN
ENRLKPLSDEAILAMIESEFDIKLVRRTITKYRKMLNIASSSERKKLYAIQG
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgaaactctctcaaaagctcaccgctaaaactaaattaaatcaaactcttcgcagctgg
ttgcctattttacaagcttctggtgatgagctaaaggagactttagagccatttttagaa
aaaaacccatttgctcagctagagccaaatccaaaaagtagatctattaatttttataac
gatctatataaaactagcataagtgatgcgatagaatcaaacataatttataaagagagc
ctttatgaaaagctatataatcaaatcgatgatagattgtttccttctcaaaagtccaaa
gagatagcaaatttgattattgagtctattagtgatgagggctattttgagtggagtgat
gagaaatttgctaattttagcaaggaggaagttgagagagttcgtgctagatttgcctat
ttagagcctattggagttggggctgtggattataaggagagttttatatttcagcttaat
gatctatgcgatgatgatgagatatataggctttgtgttgagattatagaaaattttgaa
aatatcagtaaatttacaaaacgcaaaaattatgacgccgctatgagtataataaaaaaa
ttcaaaaaccccccggcaatagagtatatggatagtgatatattagttattcctgatatt
tttgtttatgataatgatggtgcgatagaggtggctgtaaatgatgaattttatccacat
attaatattgatatagatggagttgatgaaaaaagcgagtttgtatctagtaaaatcaaa
gaggcaaaggatctaatcgatgcattagagatgcgtaaatccacgctttataagattggt
ttaatgataatagaatatcaatatgactacttctttggtggagatataaagcctatgaag
ctaaaagatatcgctgatgatttaggcagaaatccatctactattagccgtgcgatacaa
aataaatttctaagctccaaacgaggaattgtcccactaaaaaatttctttacagcagca
gcggcaaaagaggtatcaaatgccgctattaaggagtttttgctaaacttaattaagaat
gaaaatagattaaagcctttaagcgatgaggcgattttggctatgattgagagtgaattt
gatataaaattagtccgcagaactataaccaaatatcgtaaaatgctaaatattgctagc
tcaagtgagcgtaaaaaattatacgcaattcaaggctaa

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