Clinocottus analis (woolly sculpin): 137785468
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Entry
137785468 CDS
T10471
Symbol
abcd4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana02010
ABC transporters
cana04146
Peroxisome
cana04977
Vitamin digestion and absorption
cana04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
137785468 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
137785468 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
137785468 (abcd4)
04980 Cobalamin transport and metabolism
137785468 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cana04131
]
137785468 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cana02000
]
137785468 (abcd4)
Enzymes [BR:
cana01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
137785468 (abcd4)
Membrane trafficking [BR:
cana04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
137785468 (abcd4)
Transporters [BR:
cana02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
137785468 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_30
AAA_16
AAA_22
DEAD
AAA_7
AAA_5
FtsK_SpoIIIE
NACHT
DUF6079_1st
AAA_29
Zeta_toxin
nSTAND6
T2SSE
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
137785468
NCBI-ProteinID:
XP_068432824
LinkDB
All DBs
Position
Unknown
AA seq
618 aa
AA seq
DB search
MPCLGKSNGKGTKRPKLDWTFVQRFCSIQKVLFPSWTSPSVLMFGTLLVVTLTEQLIIYQ
VGVLPSHFYSVLADKDYSGFQSLVGTAMVLILLNSTLKSIDQYICNQMYVSWRRTLTESL
HTSYFQGRVYYTLNVLREEIDNPDQRISQDAERLCKQMSTMASRLIVSPFTLAYYSYHCF
YSTGWIGPVSIFGYFVIGTIANKILMGPIVSTLFEQEKLEGDFRFKHMQIRVNAESAAFY
RAGKVERMRTDRRLQTLLETQKSLINKELWLYIGVNTFDYLGGYLSYIIIAIPIFTGIYD
GLTPGELSALISKNAFVCIYLINGFTQLIDLSTTLSDVAGYTHRIGELREVMDDILRKQC
DYDPASGENYDFDSDFNINAGPADTAFILDHLSYKSPYSDKLLVEDLSLKISQGTNLLVV
GNTGTGKTSLLRVLNRLWEAQSGFVHMTTCFGPRGTVFLPQKPYLTDGTLREQVIYPLKD
IYPASGPVDDERIIQFLELAGVSSLLKRTGGLDEKVEWNWYDVLSPGEMQRLCFARLFYL
QPKYAVLDEATSALTEEAEAQLYRTCKQLGMTLVSLGHRSSLEKYHDVQLKLCGGGLWEL
TKLKGGTKNLKEEEEETP
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgccttgtttgggaaagtcaaatggcaaagggactaaaagacctaaattggactggacg
tttgttcagaggttctgcagcattcagaaggtcctgttcccatcatggaccagcccaagc
gtcctgatgtttgggacgctgctcgtggtcactctcacagagcagctaatcatttaccaa
gtgggtgtcctcccgagtcacttctacagtgtgctggcagacaaagattactcgggcttc
cagagtctggtgggcacagcgatggtgctcatcttgctcaactccacattgaaaagtatc
gaccagtacatttgcaatcagatgtacgttagctggaggaggacgctaacggagagcctc
catacatcctacttccagggccgagtctattacacactcaatgttctcagagaggaaata
gacaatccagaccagcgcatcagtcaggacgcagagcgcttgtgtaagcagatgagcacc
atggcgagccgtttgattgtatcgccgttcacgctggcttactacagctaccactgcttt
tatagcaccggctggatcggtcctgtgagtatctttggctactttgtgatcgggaccatt
gccaataaaattctcatggggccgattgtgtcgactctgtttgagcaagaaaaactggag
ggtgacttcagattcaagcacatgcagatccgtgtcaacgcagagtctgcagcgttttac
agagccggtaaagtggagcgcatgaggaccgaccgcagactgcagacgctgttagaaact
cagaagagtctaataaacaaagagctctggctgtatatcggggtcaacacgtttgactac
ctcggcggctacctcagctacattatcatcgccatcccgatcttcactggtatctatgat
gggctcactcccggggagctcagtgctctcatcagtaagaacgcctttgtgtgcatctac
ttgataaatggcttcacgcagctaatagacctgtcaaccactctgtccgatgtggctgga
tacacccacaggattggggagctgagggaggtgatggatgacatcctacgcaagcagtgt
gactatgacccggcatcaggggaaaactatgactttgacagtgacttcaacatcaatgct
ggccctgcggacaccgccttcatcctggaccacctttcatacaaatctccttactcagac
aagttgctggtggaggatctgagtctgaaaatcagccagggaacaaatctactggtggtg
gggaacacgggcaccggcaagacgtcgctactgagggtcctcaaccgactctgggaggca
caaagcggttttgtccacatgaccacatgtttcgggcccagaggaaccgtcttcctgcca
cagaaaccttatctgactgatggcacactgcgggaacaggtgatctacccattgaaggat
atctaccctgcatcagggccagtagacgatgagagaattatacaattcctggaactagct
ggagtgtccagtctcctgaagcggacaggcggactggatgaaaaggtggaatggaactgg
tatgatgttctgtctccaggtgaaatgcagcgtctctgcttcgctcgtctattctacctg
cagcccaaatatgcagtgttggatgaggccaccagtgctctgacggaggaggcagaagca
cagctgtaccggacctgtaaacagctcggcatgactttggtcagtttgggacaccgtagc
agcctggaaaagtaccatgatgtccagttgaaactgtgtggaggaggcctgtgggagtta
accaagttaaaaggaggcaccaagaacctcaaagaggaagaagaagaaacaccgtga
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integrated database retrieval system
