KEGG   Clinocottus analis (woolly sculpin): 137790145
Entry
137790145         CDS       T10471                                 
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
cana  Clinocottus analis (woolly sculpin)
Pathway
cana03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cana00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137790145 (exosc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cana03019]
    137790145 (exosc5)
Messenger RNA biogenesis [BR:cana03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     137790145 (exosc5)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 137790145
NCBI-ProteinID: XP_068440225
LinkDB
Position
Unknown
AA seq 219 aa
MDVCGSETVTLRDFGCEQSLLSRPDGSASFSQGDTSVLAAAYGPAEVKVSKEIYDRATLE
VLIQPKVGLPSVRERSQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSVLSCILNAA
CMALMDAGLPMSCLFCGVTCAIDADGQIITDPTAVQEKESRAVMTFAIDGTKHRVMMSST
KGSFSVNELQQCIAVSQKASEKIFQFYRDSVSRRYSKTL
NT seq 660 nt   +upstreamnt  +downstreamnt
atggacgtgtgcggctccgagactgttactctgagggacttcggttgtgagcagagtttg
ctgtctcgacctgacggctccgcgtccttcagtcaaggagacacaagtgtgttggccgca
gcttacggaccagctgaggtcaaggtcagtaaggaaatttatgaccgggcgacactggag
gtgttgatacagcccaaagtgggactgccaagtgtaagggagcgatcacaagagcagtgt
gtgcgagaaacctgcgaggcatcgctgctcttgtcacttcatcctcgctcctccctcaca
ctcattcttcagctgatacacgacgatggttcggtcttgtcctgcatcttgaatgccgcc
tgcatggctctcatggacgcgggcctgccgatgagttgcctgttctgcggcgtgacctgt
gccattgatgcagacggtcaaatcatcacagaccccactgctgtgcaggaaaaggaaagt
cgggctgtgatgacctttgctattgacggcacaaaacacagagtaatgatgtcgtccacc
aaaggatcgttttcagtaaacgagttgcagcagtgcatcgcagtcagtcagaaagcatcg
gagaagatcttccagttctacagagactctgtcagccgccgatactccaaaaccctctga

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