Clinocottus analis (woolly sculpin): 137793886
Help
Entry
137793886 CDS
T10471
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cana Clinocottus analis (woolly sculpin)
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137793886
Ion channels [BR:
cana04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
137793886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
ATP-synt_B
GPHH
PKD_channel
New_glue
Spem1
IQ
Motif
Other DBs
NCBI-GeneID:
137793886
NCBI-ProteinID:
XP_068446398
LinkDB
All DBs
Position
Unknown
AA seq
2023 aa
AA seq
DB search
MAQLLVPPGPDSFCPFGPESLAAIERRIVEEEARRPRAERRVDNDDENGPRPNSDLEAGK
SLPFIYGDTPPRLVSTPLEDLDTFYSNQKTFIVLNRGKTIFRFNATPALYILSPFNPLRR
VAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRVPFAGNATNSSSNGTSGDDD
AAFFIGTLLDINATFAQNDTESPFNWTEYISDERNYYFLPGRRDALLCGNGSGAGLCPEG
FTCIKAGRNPDYDYTSFDSFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIF
LGSFYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATES
GEYSGRGGPASESSSSGTSKLSSKSAKERRNRRKKRKQREEEEERGGRDKFHKSESEDSI
KRSSFRFSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGSEND
FADDEHSTFEESDSRRGSLFLPRRLERRCSAVSQTSLGAPRIVLPANGKMHCAVDCNGVV
SLVGGTSVTASPVGLLLPEGTTTDTELKKRRPGFRKPSMDYLDEPVGRQRAMSVASILTN
TMEELEESRQKCPPCWYRFANTSLIWDCCPAWLKIKDIVSTVVMDPFVDLAITICIVLNT
LFMAMEHYPMTKEFNSVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSL
SLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVF
IFAVVGMQLFGKSYKECVCKISDDCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEV
AGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRG
IAFVKSTVRQFLQSLCFGGSGKGSSLTVESKTLDELHSNGKGNCISNHTTVEITKDPSVV
YVTEGNGRPGGGLVVGIGVGVDEDAAGKYPMECDYMSFIHNPGLTVTVPIAVGESDFENL
NTEDFSSDSSDVEGSNEKLDVEPRILSSSEGSTVDIRPPGDGVDSVEMEPEESLEPEACF
TEGCVSRFQCCQINEEDEDFKNWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDVY
IEQRRTIKTVLEFADKVFTYVFILEMLLKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLVA
NAMGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIF
SIMGVNLFAGKYYYCVNTTTDVVFPIDVVNNKTDCLNLVNDSARWKNVKINFDNVGAGYL
ALLQVATFKGWMDIMYAAVDSRDVEDQPQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVII
DNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANAFQGCVFDCITKQAF
DIVIMILICLNMVTMMVETDDQTPDMDKILYRINLVFIVLFTGECVLKMISLRHYYFTIG
WNIFDFVVVILSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQITTS
AGWDGLLAPILNKREPDCDSQMEHPGNSYKGNCGNPSVAIFFFVSYIIICFLIVVNMYIA
VILENFSVATEESGEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRMQK
PNMLQLISMDLPMVSGERIHCLDILFAFTKRVLGESGEMDVLRGQMEERFMASNPSKVSY
EPITTTLRRKQEDMAAVIIQRAFRRYMLCLAMKKASTLYKERMKDGVRDPDKDVMVICKF
TENSTSDKTDMTPSTASPPSYNSVTKSDKDKYERENKEKDRKK
NT seq
6072 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccccttcggccccgagtcg
ctggccgccatcgagaggcgcatcgtcgaagaggaggcccggagaccgcgggcggagcgc
cgcgtcgacaacgacgacgaaaatgggcccaggcccaacagcgacctggaggcggggaaa
tccctccccttcatctacggcgacactcctccccgcctggtgtccacccctctggaggac
ttggacaccttctacagcaatcagaagaccttcatagtattgaatcgcggaaagacaatc
ttccgtttcaacgccactcctgccttgtacatcttaagccccttcaaccccctgaggcgg
gtagctattagagttttagtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctcagtaaccccccggaatgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtccctcataaagatcctggccaggggcttctgc
gtggggaagttcactttcctgcgggacccgtggaactggctggattttagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcgttgcgaaccttcagg
gttctgcgtgccttgaaaactatatcagtcatcccaggcttgaagaccatcgtcggcgcg
ctcatccagtcggtgaagaagctgtcggacgtcatgatcctcaccgtcttctgcctcagc
gtcttcgccctcatcggcctgcagctcttcatgggcaacctgcggcaaaagtgcgtgcgc
gtgccgttcgccggcaacgccaccaacagcagcagcaacggcaccagcggcgatgacgac
gcggcgttcttcatcggcaccctgctggacatcaacgccacgttcgcgcagaacgacaca
gagagccccttcaactggacggagtacatcagtgacgagcgtaactactatttcctcccg
ggccgtcgggacgctctgctctgcgggaacggcagtggcgctgggctctgtccagaaggc
ttcacgtgcatcaaagccggccgcaatccagactacgactacaccagcttcgactcgttc
agctgggcattcctctccctgttccgactcatgacgcaggactactgggaaaacctctac
cagcagactttgcgcgcggcagggaagccctacatgatcttctttgtgctggtgatcttc
ctgggctccttctacctggtcaacctgatcctggccgtggtggccatggcctacgacgag
cagaaccaggccaccatcgaggaggctcagcagaaggaggaggagttccaggccatgctg
gagcagctgaagagacagcaggaggaggcgcaggttgccgcggcagcagccacggagagc
ggggagtacagcgggcgagggggccccgcctccgagtcgtcgtcctcggggacgtcgaag
ctcagctccaaaagcgccaaggagcgacgcaaccggcggaagaagaggaagcagagggag
gaggaggaggagaggggcggccgcgacaagttccacaagtctgagtccgaggacagcatc
aagagaagcagcttccgcttctccatcgacgccaacaggctctcttatgagaagagatgc
tcctcgcccaaccagtctctcctcagtatccgaggatccctgttctccccccggaggaac
agccgcgccagcctgttcagcttccgcggtcgggcgcgcgacatgggctccgagaacgac
ttcgccgatgacgagcacagcaccttcgaggagagcgacagccggcggggctccctgttc
ctgccgcgccgcctcgagcgccgctgcagcgccgtgagccagaccagcctcggggcgccg
cggatcgtgctgcccgccaacggcaagatgcactgcgccgtcgactgcaatggcgtggtg
tctctggtgggtgggacctctgtcacggcctccccagtaggtctcctgctgcccgagggt
acaaccacagatactgagctcaagaagaggcggccaggttttcgcaagccatcgatggat
tatttagatgaaccggtgggccggcagagagccatgagcgtggccagcatcctcaccaac
accatggaagagctggaagagtcgaggcagaaatgccccccgtgctggtacaggttcgcc
aacacctccctgatctgggactgctgccccgcgtggctgaaaatcaaagacatcgtcagc
acggtggtcatggacccgtttgtggatctggccatcacaatatgcatcgtcctcaacacc
ctgttcatggccatggagcactaccccatgacgaaagaattcaacagcgtgctctcagtt
ggaaacctggtgttcacgggcatcttcacagcagagatgtgcttcaagatcatcgccctg
gatccctactactacttccaggagggctggaatatcttcgacggcatcatcgtcagcctc
agcctgatggagctcggcttggccaacgtggagggcctgtctgtgctccggtccttcaga
ctgctgagggtcttcaaactggccaagtcatggcccactttgaacatgctgatcaagatc
atcggcaactcggtgggggctctggggaacttgaccctggtgctggccatcatcgtcttc
atcttcgccgtggtcggcatgcagctgttcggcaagagctacaaggagtgcgtgtgcaag
atttccgacgattgccagctgccccgctggcacatgcacgacttcttccactccttcctc
atcgtgttccgggtgctgtgcggcgagtggatcgagaccatgtgggactgcatggaggtg
gccgggcagtccatgtgcctgatcgtcttcatgatggtcatggtcattggaaacctggtg
gttttaaacctgttcttggctctcctcctgagctcgttcagtgccgacaacctggcggcg
accgacgacgacagcgagatgaacaacctgcagatcgccgtgggccggatccagcggggc
atcgcgttcgtcaaatccacagtgcggcagtttctccagagcctctgcttcggcggcagc
ggcaagggctccagtttgacggtggagagcaaaacgctggacgaactgcacagcaacggc
aagggcaactgcatctccaaccacacgacggtggagatcaccaaagaccccagcgtggtg
tacgtgacggagggcaacggacggccaggaggagggctggtggtagggatcggggtcggg
gtcgacgaggacgccgcagggaagtacccgatggagtgcgactacatgtcgttcattcac
aaccccggcctgacggtcacggtgcccatcgcggtgggcgagtcggactttgagaaccta
aacaccgaagatttcagcagcgactcgtcggacgtggagggcagcaacgagaagctcgac
gtagagccccggattctaagctcatcggaggggagcacagtggatatccgccccccagga
gacggggtggattcagtggagatggagccggaggagtcactggaaccagaggcctgcttc
acggagggctgcgtgagcaggttccagtgctgccagatcaatgaggaggacgaggatttt
aagaactggtggacactcaggaaaacctgcttcatcatagtggagcacaactggtttgaa
tccttcatcatattcatgatcctgctaagcagtggagcactggcgtttgaggacgtgtac
atcgagcagcggcggaccatcaaaacagtgctagagttcgcagacaaggtcttcacttac
gtcttcatcctggaaatgctgttaaagtgggtggcgtacggcttcgccaagtattttacc
aacgcctggtgctggctggacttcctcattgtagacgtgtccctggtcagcctggtagct
aatgctatgggctactctgagctaaccgccatcaaatccctgaggacactgcgagccctc
cggcccctgagggccctgtctcggtttgagggcatgagggttgtggtgaacgcgctgctg
ggggccatcccctccatcatgaacgtgctgttggtctgcctcatcttctggctcatcttc
agcatcatgggcgtcaacctgtttgcagggaagtactattactgcgtcaacaccaccacg
gacgtggtcttccccatcgacgttgtgaacaacaagaccgactgcctgaacttggtcaac
gacagcgcccgctggaagaacgtcaagatcaacttcgacaacgtcggggccggctacctg
gctctgctgcaagtggctacatttaagggctggatggacatcatgtacgcggccgtggac
tctcgagatgtggaggaccagcctcagtacgaagtgaacttgtacatgtacctctacttt
gtcatcttcatcatcttcggctccttcttcaccctcaacctgttcattggcgtcattatc
gacaacttcaaccagcagaagaagaagtttggaggtcaggacatcttcatgacagaagag
cagaagaaatactacaacgccatgaagaagctgggctccaagaaaccacaaaaaccaata
cctcggcctgcgaatgcattccaaggctgcgtgttcgactgcatcacaaagcaggccttc
gacatcgtgatcatgatcctcatctgccttaacatggtgaccatgatggtggagacggac
gaccagacgccggacatggacaaaatcctgtaccggatcaacctggtcttcatcgtgctc
ttcaccggggagtgcgtgctcaagatgatctccctgcgtcactattacttcaccatcggt
tggaatatattcgactttgtggtggtgatcctgtccatcgtaggtatgtttctatccgaa
gtgatcgagaagtactttgtgtctccgacgctgttccgagtgatccgtctggcccggatc
ggccgtatcctccgcctcatcaaaggtgctaagggcatccggacgctcctctttgccctg
atgatgtcgctccccgctctgttcaacatcggcctcctcctcttcctcgtcatgttcatc
tacgccatcttcggcatgtccaacttcgcctacgtcaagcgcgaggcgggcatcgacgac
atgttcaacttcgagacgttcgggaacagcatgatctgcctgttccagatcaccacgtcg
gccgggtgggacggcctgctggcgcccatcctgaacaagcgggagcccgactgcgacagc
cagatggagcacccgggcaactcctacaagggcaactgcggcaacccgtccgtggccatc
ttcttcttcgtcagctacatcatcatctgcttcctcatcgtggtcaacatgtacatcgcc
gtcatcctggaaaacttcagcgtggccacggaggagagcggcgagccgctgagcgaggac
gactttgagatgttctacgaggtgtgggagcgctttgaccccgacgccacgcagttcatg
gagtacagcaagctctcggacttcgcggacgctctggatccgccgctgcgcatgcagaag
cctaacatgctgcagctcatctccatggatctgccaatggtgagcggcgagcgcatccac
tgcctggacatcctgttcgccttcaccaagcgggtgctgggcgagagcggcgagatggac
gtgctgcgcggacagatggaggagcgcttcatggcctccaacccctccaaggtgtcctac
gagcccatcaccaccaccctgcgccgcaaacaggaggacatggcggccgtgatcatccag
agagccttccgccgctacatgctgtgcctggccatgaagaaggcctccaccctctacaag
gagcggatgaaggacggcgtccgcgaccccgacaaggacgtgatggtcatctgcaagttc
acggagaactccacctcggacaaaacggacatgacgccctccacggcctcgccgccgtcc
tacaacagcgtgacgaaatcggacaaggacaagtacgagagagaaaacaaagagaaagac
cgaaagaaatag
DBGET
integrated database retrieval system
