Clinocottus analis (woolly sculpin): 137801146
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Entry
137801146 CDS
T10471
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04110
Cell cycle
cana04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
137801146 (smc1a)
04114 Oocyte meiosis
137801146 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cana03036
]
137801146 (smc1a)
Chromosome and associated proteins [BR:
cana03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
137801146 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
137801146 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137801146
NCBI-ProteinID:
XP_068454678
LinkDB
All DBs
Position
Unknown
AA seq
1232 aa
AA seq
DB search
MGYLRLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERTFTRGIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGDLAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTVEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKADMDELDDEMKAVELAKQDFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYITTSRQSLDEQKRMEEELTEEVEGAKRRIDEINTELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIVQSREKEITDLRDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSAQSE
EPSSQRTTSSTVLAKEALIEIDYSSLTEDLKDALCEEEIKAETNTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNNCFESVATN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSVLNFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaagactgattgagatcgaaaacttcaagtcgtacaaaggaagacagatc
attggaccatttcacaagtttactgcgatcatcggacccaatggatccggaaagtccaat
cttatggatgccatcagcttcgtgttggcagagaagaccagcaacctgcgtgtgaagact
cttaaggatcttatccatggagcacccgtaggaaagccagctgccaacagagcttttgtc
agcatggtgtaccaggaagataacggagaggagcgtaccttcacaaggggaatcattggt
tcctcctctgagtatcgtatcaacagcaaggtggtgggcctgcctgagtacagtgaagag
ctggaaaaacttggcattctgatcaaggctaggaacttcctggtcttccagggagctgtg
gagtctattgccatgaagaaccccaaggagcgtacagctctgtttgaggaaatctcacgt
tctggagacctggcacaggagtacgaccgtaggaagaaggaaatggttaaagcagaagag
gacacacagttcaattaccatcgtaagaaaaacattgctgctgagcgcaaagaagccaag
caagagaaagaggaggctgagcgttaccagcgtctgaaagatgaagtggccagggcaagt
gttcaattgcaacttttcaagttgtaccacaatgagactgagattgagaagctgaacaaa
gagctgggtcagcggaacaaggagattgataaggaccgtaaaaagatggaccatgtggag
gaggagctgaaggacaagaagaaggagctgggcagactgatgagagagcagcagaccgta
gaaaaagaaatcaaagagaaagactctgaattgaaccaaaagaggccacagtacatcaag
gccaaagagaacacttctcataagatcaagaagcttgaggcggcgcgcaagtcattgcaa
aatgcccagaagatgtacaagaaacgcaaggcggacatggatgagctggatgatgaaatg
aaggcagtggagctggccaagcaagactttgaggagcgcatggaggaggaggcacagagc
cagggccaggacctcaccctggaggaaaaccaggtcaagcagtaccatcgtctgaaggag
gaggctagtaaacgtgctgccacactggcacaggagctggagaagttcaaccgcgaccag
aaggccgaccaggaccgcctcgacttagaggagaggaagaaagtggagacagaggccaaa
atcaaacagaagatacgtgaaattgaagaaaaccagaaacgtattgaaaaattagaggat
tacattaccaccagcaggcagtcactggatgagcagaagcgaatggaggaggagctgacc
gaagaggtggagggtgccaagagaagaattgatgagatcaacacggagcttaaccaggta
atggagcagctgggagacgccagaatcgacaggcaggagaacagtcgccagcagcgcaag
gctgagatcatggagagtatcaaaagactctaccctggctctgtgtatggtcgcctaatc
gacctgtgccagcccactcagaagaagtatcagattgctgtgactaaagtgttgggcaag
aacatggacgccatcattgttgactcagagaagactggcagagattgtattcaatacatc
aaggagcagagaggagagcccgaaaccttccttcctctggactacctcgaggtgaaacca
acggatgagaaactgagagagctgcgaggagcaaaactggttattgatgtgattcgttat
gagcctccccacatcaagaaagccctccagtatgcttgtggaaatgctctggtctgtgag
aacgtagaggatgcacgaaggatcgctttcggagggccatacagacacaagacggtagcc
ctggatggtactctgttccagaagtctggagtcatctctggaggagccagtgacctaaag
gccaaggccaggcgctgggatgagaaggcagtggacaagctcaaggagaagaaagagaaa
ctcactgaagagctcaaggagcaaatgaaggccaagaggaaggaggcagagctgcgccag
gttcagtctcaggcccacggtctgcagatgagacttaagtactcccagagtgatctggaa
cagacaaaaacccgtcacctctcacttaacatgcaggagaagtctaaactcgagagcgaa
ttggcaaactttggccctcgcatcaacgacatcaagaggatcgtccagtcccgtgagaag
gagatcactgatctgcgagaccgcatgaacctggtggaggatgaggtgtttattgaattc
tgtaaggagattggagtgaggaacatcagagagtttgaggaggagaaggtgaagcggcag
aatgagatcgcaaagaagcgccttgagtttgagacccagaagacccgcctgggcatccag
gtcgactatgagaagaatcagttgaaagaggaccaggagaaagttatgatgtgggagcag
acggtcaagaaggacgaggctgaaatagagcgactgaagaaagaggagcacagacacatg
aagatcattgatgagacgatggcacaactgcaggaccttaagaaccagcatctcaccaag
aaatctgaagtcaacgataagaaccatgatatggaagagatccgcaaaaaactgggtggc
gccaataaggagttgactcagctccagaaggaagtgacggccatcgagaccaaactggag
cagaagcgcagcgaccgtcacaacttgcttcaagcctgcaaaatgcaggacatcaggttg
cctcttcgttctggaacgatggacgatatcagccagggagagggaagcgctcagtcagaa
gagccgagcagccagaggacgacgtccagcacggttctcgctaaagaggctctcatagag
attgactacagcagcctgactgaagaccttaaggatgcactgtgcgaggaggagatcaag
gcggagacaaacacactgcagcagcgtctgaacgagcagcaaagtatccttcagaggatc
agtgcacccaacatgaaggccatggagaagctcgagagcgtcagggacaagttccaagag
accagtgatgagtttgaggcggcccgtaagagagccaagaaggccaagcaagcctttgag
cagatcaagaaggaaagatttgatcgtttcaataactgctttgagtctgtggccaccaac
attgatgagatctacaaggccctctcacgcaacagcagtgcccaggctttcctaggccca
gaaaacccagaggagccatacctggatggaatcaactacaactgtgtggctccgggaaag
aggttcagacccatggacaacctgtctggaggagagaagactgttgctgccctggctcta
ctctttgctattcacagctacaaacccgctcccttctttgtcctggatgagattgatgct
gctctggacaacactaacatcggaaaggttgccaattatatcaaagaccagtcagtgctg
aacttccaggccatcgtcatttctctgaaagaggaattctacaccaaggcagactcgctc
attggtgtttacccagagcaaggagattgtgtcatcagtaaagtgcttacttttgacctc
tcccagtatcctgatgccaacccaaatccgaatgaataa
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