Clinocottus analis (woolly sculpin): 137804172
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Entry
137804172 CDS
T10471
Name
(RefSeq) cyclic nucleotide-gated channel beta-3-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cana Clinocottus analis (woolly sculpin)
Pathway
cana04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cana00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
137804172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cana04040
]
137804172
Ion channels [BR:
cana04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
137804172
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
137804172
NCBI-ProteinID:
XP_068459338
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MFNWVVKVVPQLPEAPETDDAAKSTGKRPPQKNNTEETSEDSQAQTGVLGWLSNGFVSAL
PQPSSSPGLTRSNSEVRSGEEERSGVIGWVTQSLTKVLPQPDEKYKETDTNEEHTEVYDV
EAMPDFDPLPHIPMVEIVSDEESEVEPPQFTPNVVNWIKRMVPQSVMLPPGAVPCDASTK
PSRSSLDKVLSPPPESLSGISLDTDSVVGWFVTGLGLKLPQPALPSKDNSEGATEVLQKA
SIKLKPDMVLEDVDSDNEGQQKHKDQSGAAAPSTPPASPSQAADQQQNATQQTQSNPEPE
PSESGGRSQEDAETQTGRWTPFIENIRKEAEGVAMASMEERLLQERIEMTRVAEEVARET
AEMAVRQMASEGQSINLSLGSKDLLQEEPEVELPEPQEEESEVDHSKVTETEPGLAEETE
ELEPKEEAEPQQTSPSPPPSPEPVQISEPEAEAEAQAETKTQETHSEAKPVTQQPQKAKE
DGQSAAVEAGEKEEEATGDDCGESSSLSLRPAVNVEDVDSDHEKGGGRGGAGGGGGVEEQ
STIPQILNPQDPKITTLTVPVTPSGGRQSKGDKDSGRNRRTIWTKNRTLHSQSEEDDDEG
GLPVRAWPSQSSLHNSDDILKERPASSASQTSTVVNERLQELVRMFKERTEKAKEKLVEL
ESSDEDSIVPSPPHTAAPHPAPGAQPVDEGEKEAQAGPSGGGRVGGGVESGAEEQQSSRC
CKVKSPRWIQACVHYRFPASIDPFTNRMYVLWMFLVALAWNWNAWFIPVRWAFPYQTPDN
IYYWLLIDYLCDLIYILDISIFQPRLQFVRGGDIVCVKKDMRKNYMTTKRFKFDVASLVP
LELFYFKTGINPLLRLPRLLKINSFFEFNGRLEAILTKAYIYRVIRTTTYLLYCLHCNAC
LYYWGSAFTGIGSTKWVYNGEGNSYIRCYYFAVKTLITIGGLPDPTTLFEIVFQLINYFV
GVFAFSIMIGQMRDVVGAATAGQTYYRTCMDNTIKYMSSYRIPKDVQNRVKTWYNYTWQS
QGMLDEQELLTQLPDKMRLDIAIDVNYSIVSKVPLFQGCDRQMIFDMLKSLRSVVYLPGD
YVCKKGEVGREMYIIKAGEVQVVGGPDGRTVFVTLRAGSVFGEISLLAVGGGNRRTANVI
AHGFANLFILDKKDLNEILVHYPESKKLLRKKARKMLTKGKKPEPKEEVKDPPQVPAAQV
RPETPKLLRAALEMSKKSGLKGALSKVKEKKSKSNVSLQPSFSSSLPPPSPTSSSGPDRD
VDTPSPISTTSTSHCPNNNNNNNNSNDSASRCHGDADEMLTGDQREEGVSGVDGNKGGKR
KGKKL
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaagtggtcccgcaactccctgaagctcctgaaacagatgac
gctgctaaatccacaggaaagcgtcctccacagaaaaacaacactgaggagacttcagag
gacagccaggcgcagactggagttttaggctggctgtctaatgggttcgtcagcgctctg
cctcaaccttctagttcccctgggctcaccaggtccaactctgaagtcaggtcaggagag
gaagaaaggtctggggtgataggctgggtcactcagagtctgaccaaggtgttgcctcag
cctgatgaaaagtacaaagagactgacaccaatgaggagcacaccgaggtctatgacgta
gaagcaatgccagattttgatcccctcccacacatcccaatggtggagattgtgtcagat
gaggagtcggaggtagagcctcctcagttcactccaaacgtggtgaactggataaagcgg
atggtccctcagtccgttatgctgccccctggtgctgtaccctgtgacgcaagcaccaag
ccatcccgttcctctctggacaaagttttatctccaccacccgagtccctcagtggaatc
tcattggatactgacagtgtggttggctggttcgtcacaggactcggcctgaagttgcct
cagccagcacttccatccaaagataattctgagggtgcaactgaagttcttcagaaagct
tcaatcaaactcaaacctgacatggtactagaagacgtggactcagacaacgagggccaa
cagaaacataaagaccagtccggcgccgcagcgccatccacaccccccgcttcaccatca
caggcagcagaccagcagcagaatgcgacacagcagacacagtccaacccagagccggag
ccgtcagagagcgggggaagatctcaagaagacgccgagacccagacgggccgctggacg
ccgttcatcgagaacatcaggaaagaggctgaaggtgttgctatggcttccatggaggaa
cgtctgctgcaggagcgcatagagatgacacgggtggctgaagaggtggccagagagaca
gctgagatggccgttagacagatggccagtgaggggcagtccattaacctctcactgggg
agcaaagatctgctgcaggaggagcctgaagtcgagctgccagagccacaagaagaggag
agcgaagtggatcacagtaaagtcacagaaactgaacctggtcttgctgaggagacagag
gaactagagccaaaagaggaagcagagccacagcagacctccccctctccacctccaagt
cctgaaccagttcagatctctgagcctgaagcagaagcagaagcacaagcagagactaag
acccaggaaacccactcagaagcgaagcctgtgacccagcagcctcagaaagcaaaggaa
gacggtcaaagcgctgccgttgaagctggtgaaaaagaggaagaagctactggggacgac
tgtggtgagagttctagcctcagccttcgtccagcagtcaatgtagaggatgtcgactca
gaccatgagaaaggaggaggaagaggaggagcaggaggaggaggaggagtggaggaacag
agcaccatcccccaaatcctcaacccccaggaccctaaaatcacaaccctcactgtccct
gtgaccccctccggaggtcgtcaaagtaaaggagataaagatagtggaaggaatcgtagg
actatctggacaaagaataggacccttcattctcaaagtgaagaagatgatgacgaaggc
ggcctccctgtcagagcctggcccagccagtccagcctgcacaattcagatgacatactg
aaagaacgtccagcatcttcagccagtcagaccagtacagtggtcaacgagcgtctgcag
gagctggtcaggatgtttaaggagagaacagagaaggcaaaagagaaacttgttgaactg
gagagctcagatgaagacagcatcgtcccctctcctcctcacactgcagctcctcatcct
gctcctggagcccagccagtggacgaaggagagaaggaggcacaggcaggtccatcagga
ggaggaagggtaggaggaggagtggagagtggggcagaggagcagcagtccagccgctgc
tgcaaggtgaaatctccccggtggatacaggcttgtgtgcactaccgcttccctgccagc
atcgaccctttcaccaatcgaatgtacgtgctgtggatgtttttggtcgctctggcgtgg
aactggaacgcgtggttcatcccagtgcgctgggctttcccctaccaaactccagacaac
atttattactggctgctgatcgactatctgtgtgacctcatatacatcctggacatcagc
atcttccagccgcgcctgcagtttgtccgtggaggggacatagtgtgtgtcaaaaaagac
atgagaaagaattacatgacaaccaaacgattcaaatttgatgttgccagtcttgttccc
ctggagctcttttattttaaaactggcatcaaccctctcctccgcttacccagactgctt
aagatcaactccttctttgagttcaatgggcgtctggaggccatcttgaccaaagcctac
atctacagagtgatccgaaccaccacctatctcctttactgtctccactgtaatgcttgt
ctttactattggggctcggccttcacgggaattggatcaaccaagtgggtgtacaatggt
gaaggcaacagttacattcgctgttactactttgctgtgaagaccctgatcaccattggt
ggtctgccagaccccacaaccctgttcgagattgtcttccaactcatcaactactttgtc
ggagtcttcgccttctctatcatgattggacagatgcgtgacgtggttggtgcagctaca
gcaggtcagacctactaccgcacatgtatggacaacactatcaaatatatgtcctcatat
cgcatacccaaagacgtgcagaaccgtgtcaaaacctggtacaactacacttggcaatca
caaggcatgctggatgagcaggagctgttgactcagttgccagataaaatgcgtctggac
attgctatagatgtcaactactccatcgtcagcaaagtccctctttttcagggttgtgac
agacagatgatctttgacatgctgaaaagcctgcgctctgttgtctacctgcctggggat
tatgtctgcaaaaagggcgaggtgggtcgggagatgtacatcataaaggccggggaggtg
caggtggttggaggtccggatgggaggacagtgtttgtcactctaagagcaggatccgtc
ttcggagaaatcagtttgctcgcagtaggcgggggtaacaggcgcacggctaatgttatc
gcccacggatttgccaatctcttcatcctcgacaagaaagacctgaatgagatcctagtc
cactaccccgagtccaagaaactgctccgcaagaaggccaggaagatgcttaccaaggga
aagaaacctgagcccaaagaagaggtgaaggatcccccgcaggtcccggcagcccaagtt
agaccggaaacacccaaactgctgagagcagccctggagatgtcaaagaaatctggactt
aaaggagctctgtctaaagtcaaagagaagaaaagcaagtctaatgtctcattacagccc
tccttctcctcctccttgcctcctccatcccccacctccagctctggacctgacagagac
gtggacaccccatcacccatctcgacaacttccacctcccattgcccaaacaacaacaac
aacaacaacaacagcaacgactctgcatcacggtgccacggtgacgcagatgaaatgctc
accggggaccaaagagaggagggagtcagcggggttgatgggaacaaaggggggaagagg
aaaggaaagaagttgtga
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