Capsicum annuum (peppers): 107850983
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Entry
107850983 CDS
T04646
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107850983
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107850983
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
WSS_VP
DUF6421
Motif
Other DBs
NCBI-GeneID:
107850983
NCBI-ProteinID:
XP_016551337
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Position
12:complement(11931364..11940244)
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AA seq
489 aa
AA seq
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MLSVICILLVSFFPLIIVSLNLTLPHQHPYPEAVVQDVQRKVNESFSRRQLLDATINTQC
QTGNPIDDCWRCDPNWSKNRQRLADCAIGFGQGAMGGKNGKYYVVSDSSDTDVVNPKPGT
LRHAVIQDEPLWIIFSGDMYIILKHELIVNSYKTIDGRGAKVHITGNGCITLQYISNVII
HNIHIYNCRPSGNTDIRSTPTHVGHRGRSDGDGISIFNSRNIWIDHCALSHCTDGLIDAI
MGSTGITISNSYFTHHDEVILLGHDDGYLPDSGMQVTIAFNHFGVGLVQRMPRCRRGYIH
VVNNDFTEWQMYAIGGSANPTINSQGNRYTAPVDANAKEVTKRVDTDEGEWSDWNWRTEG
DVMVNGAFFVPSGEGMSNQYAKASSMEPQSGAIIDQLTLNAGVFGAPRDNSISISYGGGT
TTGATGSGGGGPTTNGENDFFGMMFGSATPQNLSTTTTILMSLLIILVLYITNNYGGQLS
LQLLLLLLL
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgtcatttgcattctgttggtctcatttttcccattaattatagtttctcta
aatcttacccttcctcatcaacatccttaccctgaagctgtggttcaagatgtacaaagg
aaggtgaacgaatcattttccagaagacagctgttagacgccacaataaacacccaatgt
caaacaggcaacccaatagacgattgctggcgctgcgacccaaactggtccaaaaaccgc
cagcgcctagccgactgcgccataggctttggccagggggcaatgggaggcaaaaatggg
aaatactacgtcgtatctgattcctcagatacagacgtagtaaatccaaaaccaggaact
ctacgccacgccgtaatccaggatgaaccactttggatcattttctcaggagacatgtac
ataattttgaagcatgaactcatagtcaacagttacaaaacaattgatggacgtggagca
aaagtgcatataacaggcaatggatgtataacattgcagtatatcagcaatgtgattata
cataatatacatatatacaattgtcgtccatcggggaatacggatataaggtctacacca
acgcacgttggacatagaggaagatcggatggcgatggtatatcgatatttaattcaagg
aatatatggattgatcattgtgcattatcacattgtactgatggtttaattgatgctatt
atgggctcaactggaattaccatttcgaatagttattttactcaccatgatgaagttatc
ctattaggacatgatgatggatacttgcctgactctggaatgcaggtgacaatagcattc
aatcattttggagtagggctagtacaaagaatgccaaggtgtagaagaggatatatacat
gtagtgaacaatgattttacagaatggcaaatgtatgcgattggtggaagtgctaatcct
actattaatagtcaaggcaatcgctatactgcccctgtggatgcaaatgctaaagaggtg
acaaagcgcgtggatacagacgagggggagtggagtgactggaactggagaaccgaaggg
gatgtaatggtaaatggcgcatttttcgtgccatctggtgaaggaatgagcaaccaatat
gccaaggcgtcgagcatggagccacaatccggtgctattatcgatcaactcactctcaat
gctggtgtttttggtgccccaagggataatagtattagcatatcatatggaggtgggacc
accaccggagcaaccgggagtggcggtggtgggcccaccaccaacggcgaaaacgacttc
tttggaatgatgtttgggagcgccacaccacaaaatttatcaacaactactactatacta
atgtcacttttaattattttagttttgtatattaccaacaactatggtggccaattatca
ttacaattattgttattattattactatag
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