Capsicum annuum (peppers): 107859610
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Entry
107859610 CDS
T04646
Name
(RefSeq) probable pectate lyase 16
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107859610
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107859610
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
107859610
NCBI-ProteinID:
XP_047263026
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Position
2:complement(134729775..134731660)
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AA seq
344 aa
AA seq
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MTKSTNSLQLFAWLLICFVFTLVAGKSSHEDPTKSLHDYLPSYYPQPHKNGLLNVIDSCW
RLKGDWSSNRKALADCALGFGSSTIGGKNGDIYVVTDPSDDPVNPKRGTLRYAAIQSEPL
WIIFERDMVLTLENELMVNSYKTIDGRGAKVEISNGPCITLDYVTNVIIHGISIHDCEAG
KKGMVRSSPEHVGERLGSDGDAISVFGSSNVWIDHCYLARATDGLLDVIHASTAVTISNN
YFTEHDKVMLLGHNDEYTADRIMKVTVVFNHFGRELVQRMPRVRYGYAHVANNYYDQWLM
YAIGGSANPTIFSEGNYFIAPDKAYNKEVYKHETTLFLNWKAQT
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcaactaattccctccaactatttgcatggcttctaatttgttttgttttt
accttggtagctggtaaatcaagtcatgaagatccaaccaaatcactacatgattatctt
ccaagttattatcctcagcctcacaaaaatggcctcctcaatgtcatcgattcatgttgg
agattgaaaggcgattggtcgtcaaatcggaaggctttagcggattgtgcattaggcttt
ggaagtagtaccataggaggtaaaaatggtgacatctatgtagtcactgacccttctgat
gaccctgtaaatcctaaacgaggcacacttagatatgctgcaattcagtccgagccactt
tggatcattttcgaaagggacatggtgcttacactggagaatgaacttatggtgaatagt
tacaagactatagatggcagaggtgcaaaagttgagatttctaatggtccatgcatcaca
ttggactatgtcacaaatgtcattattcatgggattagcatccatgattgtgaggctggt
aaaaaaggcatggttaggagtagtcctgaacatgttggtgaaagattaggctctgatggt
gacgccatcagtgtgtttggatcatcaaatgtttggattgatcattgctatcttgctcgt
gcaacggatggcctactcgatgttattcatgcttcaactgcagtaaccatctccaacaat
tacttcactgagcatgacaaagttatgttattgggccacaacgatgaatatactgcagac
agaatcatgaaagtcacagtagttttcaaccattttggccgtgaactagttcagagaatg
ccaagggttaggtatgggtatgctcatgtggccaacaattattatgatcaatggttaatg
tatgccattggtgggagtgcaaatccaacaatattcagtgaaggaaattatttcattgct
cctgacaaagcttacaacaaagaggtctacaaacatgaaactactttgttcttaaattgg
aaagcacaaacttag
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