Capsicum annuum (peppers): 107860553
Help
Entry
107860553 CDS
T04646
Name
(RefSeq) probable pectate lyase P59
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107860553
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107860553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Toxin_13
NosD
SRP-alpha_N
Motif
Other DBs
NCBI-GeneID:
107860553
NCBI-ProteinID:
XP_016561434
UniProt:
A0A1U8G0D5
LinkDB
All DBs
Position
2:complement(150743031..150746051)
Genome browser
AA seq
447 aa
AA seq
DB search
MEATNFIYLSLLLFSTFFVAINGHIGEFDEVWRRRAQEADEWAQKAYKPDPMNVTFAFAK
QTKKTVTEIKESRVPLNGTRRELRGKRRDDGPCLATNPIDSCWRCQGNWADNRKRLADCA
MGFAKGTTGGKDGEIYVVTDNSDDSSNPKPGTLRYGVIQKQPLWIIFARSMNIRLTQELI
MQSDKTIDGRGVIVHIANGAGIMLQYVKNVIIHGLRIHDIHVGSGGMIRDAVDHIGQRTQ
SDGDGISIFGSSNIWVDHVSMRSCYDGLIDAVEGSTAITISNSHFTDHNEVMLFGASDSS
SIDQRMQITVAFNHFGKRLIQRMPRCRWGFIHVVNNDYTHWNMYAIGGSQHPIIISQGNR
FVAPPNDAFKKEVTKRDYSPESVWKQWPWRSQGDLFMNGAFFVESGDPDWTKKHFELFDG
ISSAPGDQVTWITRFSGALNCKIGQPC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaactaactttatatatttgtctttgttactattttccacattttttgtggca
ataaatgggcacattggtgagtttgatgaggtttggaggagaagagcccaagaagcagac
gaatgggcccaaaaggcctataagcccgacccgatgaatgtcacttttgcatttgccaag
caaactaagaaaaccgtgacggaaataaaggaatcaagggtacctctaaatggaacaaga
agagagctaagagggaaaagaagagacgatggtccttgtttagccaccaacccaattgat
agttgttggagatgccaaggaaattgggcagataatcgtaaaaggctagcagattgtgca
atgggctttgcaaaaggtaccactggtggaaaagacggcgaaatctacgtcgtaacggac
aattccgatgacagtagcaaccctaaaccaggaacactgcgttatggtgtcattcaaaag
cagccattgtggatcatttttgctagaagcatgaacattaggctaacacaagagctcata
atgcaaagtgacaagactattgatggtcgtggagttatcgttcacattgcaaatggagca
ggtataatgttgcagtacgtgaagaatgtgatcatccatggtctgcgcattcacgacatc
catgtaggcagtggggggatgatcagggacgcagtagaccacattggacaacgaacacag
agcgatggagatggtatttcgatatttggttcgtcgaatatatgggtggatcatgtgtca
atgaggagttgttacgatgggcttattgatgctgttgagggatccacggctattacaata
tccaacagtcacttcactgatcataatgaagtgatgctttttggtgcaagtgatagttct
tcaattgatcaaaggatgcaaataactgtggcttttaatcattttgggaagagattaata
cagagaatgccaaggtgtagatggggttttattcatgttgttaacaatgattacacacat
tggaatatgtatgctattggtggcagccaacatcccattattattagccagggtaaccgt
ttcgttgctcctcctaatgacgcgttcaagaaagaggtaacaaagagagattattcccca
gaatcagtgtggaaacagtggccatggagatcacaaggtgatctattcatgaatggagca
ttctttgttgaatctggagatccagattggaccaagaaacactttgaactttttgatggg
atttcatcagccccaggggatcaagtcacttggattacaaggttttcaggggcactaaat
tgcaagataggacaaccttgttaa
DBGET
integrated database retrieval system
