Capsicum annuum (peppers): 107864235 Help Entry 107864235         CDS       T04646                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cann  Capsicum annuum (peppers) Pathway cann03040   Spliceosome cann04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cann00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107864235   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     107864235  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cann03041]     107864235    04121 Ubiquitin system [BR:cann04121]     107864235    03400 DNA repair and recombination proteins [BR:cann03400]     107864235 Enzymes [BR:cann01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      107864235 Spliceosome [BR:cann03041]  Complex B   Other components    Prp19 complex     107864235  Complex C    Prp19-CDC5 complex     107864235 Ubiquitin system [BR:cann04121]  Ubiquitin ligases (E3)   U-box type E3    107864235 DNA repair and recombination proteins [BR:cann03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     107864235 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_EML_2 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF12 Beta-prop_EIPR1 Beta-prop_WDR41 U-box Beta-prop_RIG_2nd PEP5_VPS11_N Ge1_WD40 PROPPIN Beta-prop_DCAF4 RMC1_N zf-Nse KNTC1_N Beta-prop_SPT8 Beta-prop_VPS8 WD40_like PAS_11 Beta-prop_ACSF4 WDR54 PUMA_CC Motif Other DBs NCBI-GeneID:  107864235 NCBI-ProteinID:  XP_016566047 LinkDB All DBs Position 3:11424456..11435701 Genome browser AA seq 521 aa AA seqDB search MNCSISGEVPEDPVVSKKSGLLFERRLIERHISDFGKCPVTGEPLTVDDIIPVKTGKIVK PRPVQAASIPGMLGMFQIEWDGLMLSNFSLEQQLHTARQELSHALYQHDAACRVIARLKK ERDDARAFLAQAQRQIPMAATTAVGTTALSNGIRAAEDEEMGPEGKKIRPGISHSVIETL TECNAALSQQRKKRQIPATLAPVDAVERYTQLNSYPLHKTTKPGILSLDIHYAKDIIATG GVDSNAVVFNRPSGQIISTLSGHSKRVTSVKFAADGEIVVSGSADKTVRVWQSSENENYD CRHVLKDHTAEVQAVTVHATNNYFVTASLDSTWCFYDLSSGLCLTQVADASESEGYTSAA FHPDGLILGTGTSGSLVKIWDVKSQANVAKFDGHVGSVTAISFSENGYFLATAAQDGVKL WDLRKLKNFRTFSPYDENTQTQSVEFDHSGSYLALGGSDIRVYQVASVKAEWNHIKTFPD LSGTGKATCLKFGPDASYVAVGSMDHNLRIFGLPVEDQMED NT seq 1566 nt NT seq  +upstreamnt  +downstreamnt atgaactgttcaatttccggtgaggtgccggaggatccagtggtttcaaagaaatccgga ctccttttcgagaggcgattaatcgaaagacacatctctgattttggtaaatgtcctgtt actggagagccattgacagtggatgacattatccctgttaaaactggcaagatagttaaa ccccgacctgtacaggctgctagcattcctgggatgttgggaatgtttcaaatagaatgg gatggtctgatgctatcaaatttttcattggaacaacaattgcatactgctaggcaagag ctgagccatgctttatatcagcatgatgctgcatgcagggtaattgcaaggctgaagaag gaaagggatgatgcaagggcatttcttgcccaggctcaaagacaaataccaatggcagcc actacagcagttggcactactgctttaagcaatgggataagagctgctgaggatgaggag atgggccctgagggcaagaaaattcgccctggaatatcacactctgtcattgagactctt acagaatgtaatgctgccctttcacaacagaggaaaaaacgacagataccagcaacattg gccccagtggatgctgtggagagatatacccaattgaatagttatcctctgcacaaaacc actaaacctggcattttgtctttagatattcattatgctaaggatataattgctaccggt ggagttgattcaaatgctgtggtcttcaatcgaccttcaggacagatcatatcaacacta agtggtcattcgaagagggttaccagtgtaaaatttgcggctgatggtgaaatagtggtc tctggttcagcagataagacagttcgtgtgtggcaaagttctgaaaatgaaaattatgac tgtaggcatgtcttgaaggatcatacagcagaggtgcaagctgtcactgtccatgcaacc aataattattttgtgactgcttctcttgatagcacgtggtgcttttatgatctttcgtct ggtttatgccttacccaggtagcagatgcttcagaatctgagggctacacttccgcagct ttccaccctgatggtctgatccttggaacagggacttcagggtctcttgtcaagatatgg gatgtaaaaagtcaggcaaacgttgcaaaatttgatggccatgtggggtctgtaactgct atttccttttcagaaaatggttatttcttagcaactgctgctcaagatggtgttaaactt tgggatttacgcaaattgaagaactttagaactttctctccctacgatgaaaacacgcaa actcaatcagtggaatttgaccatagtggaagttatcttgccttaggaggttcagatata cgagtttatcaagtcgccagtgtcaaagctgaatggaatcacatcaaaaccttcccggac ttatcaggcacaggcaaagcaacatgtctgaaatttggtccagatgcatcatacgtagct gttggatctatggaccataatctaagaatatttgggctgcctgttgaggatcaaatggag gattag

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