Capsicum annuum (peppers): 107866520
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Entry
107866520 CDS
T04646
Name
(RefSeq) pectate lyase 1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107866520
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107866520
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
EFF-AFF
Motif
Other DBs
NCBI-GeneID:
107866520
NCBI-ProteinID:
XP_047256337
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Position
12:complement(113459932..113460907)
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AA seq
385 aa
AA seq
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MKKTNYNKPSYIMLTTAMVAILITTSSTSFVHGFNVIDKCWRRDPNWRSHRQQLAKCSVG
YSGKMTNNIGVGDELIKYKVTDTSDDPLNPKPGTLRYAMTHIQGKIWVTFERNMNIRLQK
PLLVSSFTTIDGRGVEVHIADGACLMLQRVTNVIIHGIKIHNCKAQTASTVLGPDKKIVN
VGPVDGDAIRMLTSYKIWIDHNTLYDCEDGLIDVTRGSTNITISNNWFRTQNKVMLLGHD
DGFLRDKNMKVTVAFNYFGPNCNQRMPRIRHGYAHVVNNVYKGWGSYAIGGSMNPSIKSQ
ANYFFAKGGRNEVTWKQESGEVEGNFQSVKDVFANGACFNGSGSGRDAVRPNYTPEQAFP
VEDGHKVKELTKNAGVLKCPTSSTC
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaactaattacaacaagccttcatatatcatgttgactactgctatggttgct
atactaataacaacttcaagtacaagttttgtgcatggatttaacgtgattgataaatgc
tggagaagagatccaaactggaggagtcacaggcaacaattagctaaatgctcggttggt
tattctgggaagatgactaataatattggagttggagacgagttgatcaaatacaaggtt
actgatacaagtgacgatcccttaaaccctaaacccggaactctaagatatgcaatgacg
catattcagggaaagatttgggtaactttcgaaaggaacatgaatattaggctccaaaaa
ccccttttagtcagcagcttcaccaccattgatggccgtggagttgaggttcatattgct
gatggcgcctgtctcatgcttcaaagggtgacaaatgtgatcattcatggtataaaaatc
cacaattgcaaggcacaaactgcctcaacagtcttgggacctgataaaaaaattgtaaat
gtgggtccagttgatggagatgcaattcgaatgttgacttcttacaagatttggattgat
cataacaccctctatgattgtgaagatggtcttattgatgtcactcgtggttcaacaaat
attactatatccaacaattggtttaggacgcaaaataaggttatgttgctaggtcatgat
gatggattccttagagacaaaaatatgaaggttactgttgcattcaactattttggtcct
aattgcaaccagagaatgccaaggattcgtcatggatatgcacatgtggtcaacaatgtt
tacaagggatggggtagctacgcaatagggggaagcatgaacccaagcattaagagccaa
gccaattatttctttgcaaaaggaggaaggaacgaggtcacatggaaacaggagagtggt
gaagtggaagggaatttccagtcagttaaagatgtatttgcgaacggagcatgtttcaat
ggatcgggttctggtcgtgacgccgtgcggccaaactatacgccagagcaagcgtttcca
gtggaagatggacacaaggtcaaggagttaacaaaaaatgcaggtgtcttaaaatgtcct
acttcttctacctgctga
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