Capsicum annuum (peppers): 107875326
Help
Entry
107875326 CDS
T04646
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cann
Capsicum annuum (peppers)
Pathway
cann00040
Pentose and glucuronate interconversions
cann01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cann00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107875326
Enzymes [BR:
cann01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
107875326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Methyltransf_9
Motif
Other DBs
NCBI-GeneID:
107875326
NCBI-ProteinID:
XP_016577488
LinkDB
All DBs
Position
6:227366508..227373071
Genome browser
AA seq
434 aa
AA seq
DB search
MAAALRSSCFCFVPLLIVLILFINTSADNSIEEAKQFQGLRNSTMMNRFSRNDEPTHEHA
VDDPAAISSMVNMSIRNSTERRKLGYFSCMTGNPIDDCWRCDRKWQRNRRRLADCSIGFG
RNAIGGRDGRFYVVTDAGDDDPVNPRPGTLRHAVIQDEPLWIVFKRSMLITLKQELIMNS
FKTIDARGVNVHIAYGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPSHYGWRTMADG
DAISIFGSSHIWVDHNSLSNCADGLVDAIMGSTAITISNNYFTHHNEVILLGHSDSYVRD
KVMQVTIAFNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRYLA
PVNPFAKEVTKRVEPWEGSWRHWNWRSEGDLMLNGAYFTASGRAAPASYARASSLAAKSS
SMVGTITSSAGALY
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctttgagatcatcatgtttctgttttgttccattgcttattgttttgata
ctattcatcaatacgtctgccgataacagtattgaagaagcaaagcagtttcaggggtta
aggaattcgactatgatgaacaggttcagtcggaacgatgaacccacgcatgaacatgca
gtagatgatccagctgccatttcttccatggtgaatatgagcattagaaatagcacagag
aggaggaaactgggctacttctcatgtatgacgggaaatcctattgatgattgttggcga
tgcgatcgcaaatggcaacgtaatcgcagacgcttagccgactgttcaattggctttgga
cgcaatgccattggtggccgagatggcaggttttatgttgtgaccgacgcaggtgacgac
gaccctgtaaatccccgacctggaacacttcgtcatgctgtaattcaagatgaaccattg
tggatagtgtttaaacgtagcatgctcatcacccttaagcaagaattgatcatgaacagt
ttcaagacaattgatgctcgtggtgtgaacgtgcatatcgcgtatggggcttgtattact
atccagtttgttactaatatcatcattcatggtcttcatattcatgattgtaaaccaact
ggtaatgccatggttcgaagctcaccatcacattatggttggaggactatggctgatggt
gacgccatttccatttttggttcgagccatatttgggtcgatcacaactctctctctaat
tgtgctgatggtcttgttgatgctatcatgggttcaactgcaattaccatctcaaacaat
tacttcacccatcacaatgaggtgattttattggggcacagtgactcctatgtcagagat
aaggttatgcaggtaactatagctttcaaccattttggggagggtctcatccagagaatg
ccaagatgtaggcatggttatttccatgtggtgaacaatgactacacacactgggagatg
tatgccattggtggtagtgctgatcctacaattaacagccagggcaacagataccttgca
ccagtgaatccttttgccaaagaggtgacgaaaagagtggaaccatgggaaggatcatgg
aggcactggaactggagatcagagggagaccttatgttgaatggagcatattttacagca
tctgggcgtgctgctccagccagctatgcaagagcctcgagcttagctgctaaatcatct
tccatggtgggaactattacctcgagcgccggtgcactttattga
DBGET
integrated database retrieval system
