Magallana angulata (Portugese oyster): 128175906
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Entry
128175906 CDS
T09348
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
canu
Magallana angulata (Portugese oyster)
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
canu04040
]
128175906
Ion channels [BR:
canu04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
128175906
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
IQ_SCN5A_C
GPHH
Motif
Other DBs
NCBI-GeneID:
128175906
NCBI-ProteinID:
XP_052697740
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All DBs
Position
3:44165393..44207080
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AA seq
1989 aa
AA seq
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MEEEEFFRLLTPQSLVQIDERIAEEKAFKKAEKQAHEEGEEEELAAHEEEEPKPNPKFEA
GKKLPLSLKDLFPVEYTSKPLEDFDEFYDTQKTFVVVGKDMTIYRFSATNAVYLLSPFNP
LRRGALYVLVHPLFSALIIITIIINCAFMAMTEVPAGWIEYVFTGVYTLEAMIKITARGF
IINNFTYLRDPWNWLDFAVISLAYFETCIIQPLNLTEDGLGNLAALRTFRVLRALKTVAV
IPGLKTIVGALLEAVRRLRDVMILTVFMLSIFALVGMQLYMGTLRQKCVTFANFTYDNST
EGNDTLKSFDEAWYEWAMDTENWKKIEGTGEFLICGNASGAGECPSEYICINDTHTNPDF
NFTHFDNFGTALLCTFRLMTQDFWENLYQITLRAEGPYHSAYFVIVILLGSFYLVNLILA
IVAMSYDETQKQDQADADEEAEERKKAKRIHAIQQTMHDELREDYHEYLEEKMSQAKSQS
DTSLSDHENADKISLRSNKPDENGQFLSVMKKQPSLSLPGTPFVRRNTKKKYKPNHADHQ
PLMLDNLPFIDDPNAVTPCSDDLTMNLTYKQFIASRRGSYASLLKRTGSSRRSSFASRDS
RRSLPKSPRSPLEKPGKLDTPWDWKKPKDSSLLHPHDAGDRGKLVENGSINGSRMDIEKK
SHDGEICHPHGGKHVDPRDMMVLKSLLAHAEGHRNSRHSVMSDYLPFEEEEEPLKDRLYK
RFCSWTCCPCYLKFQEIVGLIVLDAFVDLFITICILANTAFMAADQHPKSPELTEILQNG
NYVFTAIFASEAFLKLIALSPMHYFRDGWNCFDFLIVFLSFLEMALDGVSGLSVLRSFRL
LRVFKLARSWQTLNMLIRIVAGTMGALGNLIFVLAIVVFIFAVMGQQLFRDGYIAEYGDD
MPRWSFTDFLHSFMIIFRVLCGEWIQSMWGCTNANGPICVPFFLLTYVIGNLVVLNLFLA
LLLNSFGAESLSGGESEEDKEPNKLSEAIDRFKRFGRWVKVKVIVCLKVKMKAKPKANER
EPSPRVNGKETIPDGEATFSNGTLIEMQTKFDDDEISVQGDVDLVDNHSPDKSTTIVVED
EKKAEDITRPNSRASPRESLSSNSHHSMSDDDTKLSLTKVDADGEPEINEVKVTYANYPD
DCFCKICRRKCPCCIRFENTKWGKKAWKIRCLAYALVEHKYFETFIITMILASSIALAIE
DVYLEERPTLEQILQITDKFFTTVFIIEMFIKWTAFGFKKYFTDAWCWLDFVIVGISIVM
LVFELLGMEKVGAIKAMRTLRALRPLRAVSRWEGMRVVVNALIKAIPSIANVMMVCLIFW
LIFGIVGVQFFAGKFYKCVDEDGNKLSVNITKNKFECLEKNYTWINSKINFDDVLMSYLA
LFQVATYKGWIEVMNDAIDSKEIDEQPEREVNVYMYLYFVFFIIFGSFFTLNLFIGVIIE
NFNQQKKKAGGSLEMFMTEDQKKYYKAMKRMAAKSPQKSIPRPGNIIMGWIFDAVTNQKF
DIGIMIIIMLNMLTMALEHYKQSQMFTTILNHVNMSFIIIFTVECVLKLIGLRHFYFKFP
WNIFDFVVVVLSILGEIVSVALSDVMDQFLVSPTLLRVVRVFRVGRVLRLVKSAKGIRTL
LFSLAVSLPALFNIALLLFLVMFIYATFGMSFFMHVKHQYGIDDCFNFETFFRSMIYLFQ
MCTSAGWDGALAGITNEEDCIKETVRFDNGTTIYSDCGNYKAGVMFLTSYLVISFLVVVN
MYIAVILENFSQATEDVQQGLTSDEFDLFYEKWEKFDPEATKFIQLSQLSDFVDYLEEPL
RLPKPNHFMLVKLDIPICEDDKVYCRDILDALTKNFLGTSDTPGEIDVNEVDKDKEKIEY
HVTSSTLMRQKEHYAARVIQKAWRRYRNEKGNLPSPPPYDMVISKESDMVTSKESDMATS
KDSKDTATTIHEDTASTKSVKSDTSTKQTAGSSIDVHIEIPESEITEETAMLSPENRTVE
LRADSDVVA
NT seq
5970 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagaattcttcaggcttttgactcctcagtcacttgtgcaaatagatgaa
cggatagcagaggaaaaagcgttcaaaaaagcagagaaacaagcccacgaggagggcgag
gaggaggaattagctgcccatgaagaagaggaaccaaaacccaacccaaaatttgaggcg
ggaaaaaagctccccctatcgctcaaggatctgtttccggtggaatatacaagcaaacct
ctggaagacttcgatgaattttacgatacgcaaaaaacatttgtggtggtcggaaaggac
atgaccatttacaggttcagcgctaccaacgccgtctatctgcttagtccctttaaccca
ctcagaaggggcgccctctatgtcctagttcatccattattcagcgcgttaatcattatc
accatcattatcaactgtgctttcatggccatgacagaggtgccagcggggtggatcgaa
tatgtattcacgggtgtgtacactttggaggctatgatcaaaattactgctcgagggttc
atcatcaacaatttcacttacctaagagacccttggaattggctagatttcgctgtcata
tccttggcgtactttgaaacttgcataattcaaccgcttaatttaacggaggacggcctc
ggaaatttagccgctcttcggacctttcgagttctccgagcacttaaaactgtagctgtt
attccaggcttgaaaaccattgttggtgccttactggaagcggtgcggcgactccgtgac
gtcatgattctgacagtcttcatgctctcaatttttgccttagttggtatgcaattatac
atgggtaccctcagacagaaatgtgtcacatttgcaaacttcacgtacgacaattctact
gaagggaacgatactctcaaatcgttcgacgaagcttggtacgagtgggcaatggacaca
gaaaactggaaaaagatagaaggcactggtgaatttcttatctgtggaaatgcttccgga
gcaggggaatgtccgagtgaatatatatgcattaatgacactcacacaaacccagacttc
aacttcacccattttgacaacttcggaactgctcttctttgtacattccgtttaatgaca
caagacttttgggaaaatctttatcaaataactctccgagcagaaggtccctaccatagc
gcctactttgtcatcgtgatactgctgggctcgttctatctcgtcaatctgatcttggct
atcgtcgccatgtcgtacgatgagactcagaaacaggaccaggccgatgccgacgaagag
gcggaggaacgaaagaaagcaaaacgaatccatgcgattcaacaaacaatgcatgacgaa
ctacgggaagattatcatgaatatctggaggaaaaaatgtctcaagcaaagagccaatca
gacacgtcgttaagtgaccatgaaaatgcagacaaaatcagtctccggtccaataaaccg
gacgaaaacggacaatttctgagtgtcatgaagaagcaacctagtttgagtttgcccggc
acaccgtttgtacggagaaacacaaagaagaaatataagcctaatcacgctgaccatcaa
cctttaatgctggacaatctaccctttattgacgatccaaatgccgttaccccatgttcg
gatgatttaactatgaatctgacttataagcaattcattgcgtcacgaagaggtagctat
gcgtcattattaaaacgcactggttcctcgagacgcagtagtttcgcgtcacgtgacagc
aggcgatccctaccgaagtctccccgctctcctttagaaaagcccgggaaattagatact
ccgtgggactggaaaaaaccaaaggacagctccctgctccacccccatgacgcaggggac
aggggtaaacttgttgagaatgggtcaataaatgggtcacgaatggatattgagaaaaaa
tcgcatgacggtgaaatatgccaccctcatggggggaagcacgtagacccgagagacatg
atggtgctgaagagtcttttagcgcatgcggaaggccaccggaacagcaggcatagtgta
atgagcgactaccttcctttcgaggaagaagaggagccactgaaggacagattgtacaaa
cgcttctgtagctggacctgctgcccttgttacttaaaattccaggagatagtcggtctc
atcgtgttggatgcttttgtagacctcttcatcaccatttgtatcctagcaaacactgcc
ttcatggcggctgatcagcatccgaaatctccggaactcacggaaatcctacaaaatgga
aactatgtcttcacagcgatatttgcctccgaggcttttctcaaactgattgcccttagt
cccatgcactacttcagagatggctggaactgctttgatttcttgatcgtgtttctcagc
tttttagaaatggcgttagatggcgtttccggtttatcggttctcaggagcttccgtttg
ttacgagtgttcaagctggcgcggtcatggcagactttaaacatgttgatccgtatcgtg
gctggcacgatgggagcgctgggcaacctgatctttgttcttgccattgtggtgtttata
ttcgctgtgatgggacagcagttattccgagacggatatatagctgaatatggggacgac
atgccgaggtggagtttcactgactttctccactcgtttatgattatcttccgtgtgttg
tgtggggagtggatccagtccatgtggggctgcacgaacgccaatgggccgatctgtgtc
ccgttctttctgttgacttacgtcataggcaacctggttgtacttaatttgtttcttgcc
ttgctgttgaactcgtttggagctgagagtcttagtggaggagaaagcgaagaagacaag
gaacccaacaaactctcggaggccatcgatagatttaaacgatttggaagatgggtcaaa
gtcaaagtgatagtgtgtttgaaagtgaaaatgaaagctaaacccaaagcgaacgagaga
gaaccaagcccgcgtgtgaatgggaaggagacgattccagacggggaggcgacattcagc
aacggtacactgattgaaatgcagactaaatttgacgatgacgaaatctctgttcaagga
gatgtagatctagtggataaccactcacccgacaaatcaacaacaattgttgtggaagac
gaaaagaaagcggaagatatcacacgcccaaacagtcgtgcgagtccaagggaatccctg
agttccaacagtcaccattcaatgtcagacgatgacaccaagttgagcttaaccaaagtc
gacgcagacggcgaaccggaaataaacgaggtcaaggtcacttatgcaaactacccggat
gactgtttttgtaaaatctgccgacggaagtgcccgtgctgcatacggtttgagaacacg
aaatgggggaagaaggcttggaagatacgatgtttagcttatgccctggtcgaacacaaa
tattttgagactttcattattacaatgattcttgccagtagtatcgctcttgcaatcgaa
gatgtatacttggaagagaggccaacgctggaacagattcttcaaataacggacaagttc
tttaccactgtattcattatagaaatgttcataaaatggactgcgtttggattcaagaaa
tattttacagatgcgtggtgttggcttgactttgttatcgttgggatttcaatcgtaatg
ctggtcttcgaactgcttggtatggaaaaagtcggtgcaataaaagccatgaggacgctg
agagccttacgacccctaagagctgtgtcccggtgggagggaatgagggtcgtcgtcaat
gctttgatcaaagccattccttccattgccaatgtcatgatggtgtgcctcattttctgg
ttgatatttggaatcgtcggggtacagttcttcgccggcaagttttacaaatgcgtggat
gaagacggaaacaaattgtctgtaaacatcactaaaaacaaatttgaatgtctagaaaaa
aattatacatggataaactccaaaatcaactttgatgacgtactgatgtcgtacctggca
ttgttccaagtagcgacatacaaaggatggatcgaagtaatgaatgacgcaatagacagc
aaagaaattgacgagcagcccgagcgagaagtcaatgtttacatgtacctgtacttcgtc
ttctttatcatattcggttcattctttaccctgaatctgttcatcggtgtcatcattgaa
aacttcaatcagcagaaaaaaaaggctggaggatcgttagaaatgtttatgacagaagac
cagaagaaatactataaagcgatgaagcggatggcggccaagtctccacaaaaatcgatt
ccaagaccaggaaatataatcatgggatggatttttgatgctgtgaccaaccagaaattt
gacatcgggatcatgataataatcatgctgaacatgctgaccatggcgcttgaacactac
aagcagtcccagatgtttacgaccatcttgaaccacgtgaatatgtcgttcatcattata
ttcacggtcgagtgtgttctcaaacttataggactgaggcatttctacttcaagttccca
tggaatatatttgactttgtggtagtggtactttcaatcctaggagaaattgtcagcgtt
gcgctgagtgacgtcatggaccaattcctggtctcgcctacgcttcttcgagtggtcagg
gtcttcagggttggcagagtgctccgtttggtcaagtcggcgaaagggattcgaactttg
ttattttctcttgccgtgtcgttgcctgctttatttaatatcgctttactgctgtttctt
gtaatgtttatatatgccacgttcgggatgagtttctttatgcatgtaaaacaccaatat
ggcatagatgactgttttaactttgaaacattcttccgaagtatgatatatttgttccaa
atgtgtacatcggcaggctgggatggcgccctggccggaattacgaacgaggaggattgt
attaaggaaactgtccgatttgacaatggcacaactatatacagtgactgtggtaattac
aaggcgggtgttatgttcttgacttcctacttagttataagcttccttgtggtagtgaat
atgtacatagccgtcattttagagaacttcagtcaggcaacagaagatgttcagcaaggt
ttaacttctgacgagtttgacctgttctatgagaaatgggaaaaattcgacccagaggct
acgaaatttattcaacttagtcagttgtctgactttgtggattacctagaagaaccgttg
agacttccaaaacctaatcactttatgcttgtgaaattggatattccgatttgcgaagat
gacaaagtgtattgcagggatattctagatgccctaacgaagaacttcctggggacctcg
gacacgccgggggagattgacgtcaacgaggttgacaaagataaggagaaaatcgaatat
cacgtgacaagttctacccttatgcgacagaaagagcactacgccgcaagggttatccag
aaagcctggagaagatacagaaacgagaagggaaatttaccctcgccacccccatacgat
atggttattagtaaggaaagtgatatggttacaagcaaagagagtgacatggcaaccagc
aaggatagcaaagacacggcaacaaccattcacgaagataccgcaagcacaaaaagtgta
aagagtgacacatccaccaagcagacggccggaagttctatcgacgtgcacattgagatt
ccggaatcagaaatcaccgaagaaacggcaatgttgtcaccggaaaatagaacggttgaa
ctacgcgcagatagtgacgtagtggcttga
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integrated database retrieval system
