Magallana angulata (Portugese oyster): 128187901
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Entry
128187901 CDS
T09348
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
canu
Magallana angulata (Portugese oyster)
Pathway
canu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
canu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128187901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
canu03019
]
128187901
Messenger RNA biogenesis [BR:
canu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128187901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_1
SRP_TPR_like
TPR_2
Motif
Other DBs
NCBI-GeneID:
128187901
NCBI-ProteinID:
XP_052714535
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All DBs
Position
6:complement(26620479..26629463)
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AA seq
694 aa
AA seq
DB search
MADNKAKNDSDAEMETSMPLPQVTESQKELASQAMSEFDKKQYGSCCSLMHKLIAQRPTD
PKVAHNKAVAEFFQSGFLTTDEFRQQLSKVCQMAHVNIDNSESLEDVDHSVIYFNQAVIL
YHLRQYKAALNILDKLFQYIEPLEEALAKKATMLLVELYLCTYQPEKAMGMVHYAEKTVF
TAGKNAGEKENKEDQVDEAWKPKISLYKTRCLLMMKSMKSCKREIKSLMSTQAMNTAVIY
LKSNFEHLRGNHKKAMKMLGSVSTSDFTEAGECMPVMYNNNLGCIHFHLSKHHLGAFHFR
KAFQENENAIKDIKRGAEHNKNLSGKTLNSIGMSRHFELLYNMGIQLLHCGKAMPAFDCL
VEAVQVFRSNPRLWLRLAECCIMANRQNNDEDRKLEKRLEVIQGSDGSGIHRKLRLGPGL
KKDNPSPGTPAIPAATHEFAALCLKNALHLLPEDPLTAEKVPIEDSDTVKITPEMVLVPA
PPGNPLKAAEVASLRCSILAASAYVALCLNDYTLALLHAENLLKQPKLTGAQRYLGHLYM
AEAQVAMDKIADAIQLLNPELVVDISLTLPENKTEQDKSERDPEASESKGYFYPWSPKDL
TRAKAIAQYNLATAHAIRGEYDKAGQNLGESSSRIGTPLPAQMYFLKLYLDLIEGRRNMA
QVVIKDHFGHVTPNRVEMKMNSKPGVPRPDTAVS
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaacaaagcaaaaaatgactcagatgcagagatggagacctcaatgcccctc
ccccaagtaactgagtcccagaaagaactggcctcccaggctatgtcagagtttgacaag
aagcagtatggctcgtgctgcagtttgatgcacaagctaattgcccaaagacccacagac
ccaaaagttgcccacaacaaggcagtagcagaattttttcaaagtggattcctgaccact
gacgaattcaggcagcaactgtccaaagtctgtcaaatggctcatgtcaacatagacaac
agtgaaagcctggaagatgttgaccacagtgttatttacttcaaccaagcagtcattctc
tatcacttacgtcagtataaagctgccctcaacatcctagacaaactcttccagtacata
gagccactagaggaggccttggcaaagaaagctacaatgctgttagtagaactgtatctg
tgtacctatcagcctgagaaagctatgggtatggtgcactatgcagagaagactgtgttc
actgcagggaagaatgctggagagaaagagaacaaggaagatcaagtggacgaagcctgg
aaaccaaagattagtttgtacaaaacccgctgcttactgatgatgaagtccatgaagtcc
tgcaagagagagatcaagtcactgatgagcacccaggccatgaatacagctgtgatatac
ctgaagagtaactttgaacacttgcgagggaatcacaagaaggccatgaagatgctgggc
tcagtcagcacctctgatttcacggaggccggggagtgtatgccagtcatgtataacaac
aatctcggctgcatacacttccatctcagcaagcatcatctaggggcgttccacttccgt
aaagctttccaggaaaatgagaatgccatcaaagacatcaaacgaggagcagagcacaat
aagaatctttctggtaaaacactgaactccataggcatgagccgacattttgagttgtta
tacaacatgggaattcaactgttgcattgtgggaaggccatgccagcatttgactgtttg
gttgaggcagtacaggttttcaggagcaaccctcgcctgtggctgagactagcagagtgc
tgcataatggctaatagacagaataatgatgaagaccgaaagctagaaaagaggttagag
gtcattcagggatcagatggcagtggaattcacaggaagcttagactgggcccgggactc
aaaaaagataacccaagtccagggactccagctatcccagcagccactcatgagtttgct
gcgctttgtctgaagaatgcgttacacttgctgcctgaagatccgctaacagcggagaaa
gtgcccattgaagactcggacacagtaaaaatcacccctgagatggtccttgttcctgcc
cctcctgggaaccccctgaaggcagctgaagtggctagcctaaggtgctctatactggca
gctagtgcatatgtggcactttgtctgaatgattacacactagcattgcttcatgcagaa
aacttacttaaacagccaaaactgacaggggcccaaagataccttggtcatctttacatg
gctgaagctcaggtagctatggacaagattgcagatgccatccaacttctgaacccagag
ttagtggtagacatcagcctgacactgccagaaaacaagacagagcaagacaaaagcgag
agagacccagaagcatctgaatctaaaggttatttttacccctggtcacccaaagatctg
acacgggcaaaagccattgcccagtataacctagccactgcccatgccattcggggggaa
tatgacaaggcaggacagaatctgggagagagttctagccgcattggcaccccactgcca
gcacagatgtatttcctgaaactttacctagatttgatagaagggagaagaaatatggct
caagttgtgatcaaagaccactttggacatgtgacacctaaccgtgtggaaatgaagatg
aactccaagccaggagtgccccgccctgatactgcagtgtcatga
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