KEGG   Caldilinea aerophila: CLDAP_17900
Entry
CLDAP_17900       CDS       T01797                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III gamma and tau subunit
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
cap  Caldilinea aerophila
Pathway
cap03030  DNA replication
cap03430  Mismatch repair
cap03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CLDAP_17900 (dnaX)
   03430 Mismatch repair
    CLDAP_17900 (dnaX)
   03440 Homologous recombination
    CLDAP_17900 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cap03032]
    CLDAP_17900 (dnaX)
   03400 DNA repair and recombination proteins [BR:cap03400]
    CLDAP_17900 (dnaX)
Enzymes [BR:cap01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CLDAP_17900 (dnaX)
DNA replication proteins [BR:cap03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CLDAP_17900 (dnaX)
DNA repair and recombination proteins [BR:cap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CLDAP_17900 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA DNA_pol3_gamma3 AAA_5 RuvB_N AAA_22 AAA_16 AAA_19 AAA_14 AAA_30 AAA_2 TIP49 AAA_18 Mg_chelatase DUF815 AAA_7 Rad17 AAA_11 AAA_24 TsaE RNA_helicase AAA_28 Zeta_toxin MRB1590_C
Other DBs
NCBI-ProteinID: BAL99829
UniProt: I0I3J2
LinkDB
Position
complement(2246343..2248016)
AA seq 557 aa
MSTALYRKWRSQTFDEVVGQEHVTQTLKNALRDGRVAHAYLFAGPRGTGKTSTARILAKA
LNCTAPEAERPCNRCPTCQAITEGRMIDLIEIDAASNNSVDDIRELREKVGFRPSEGRYK
IYIIDEVHMLSGSAFNALLKTLEEPPPHARFILATTEPHKIPATVISRCQRFDFRRIPAS
EIARHLQHIVEAEGFDAEPDALLMIARSAQGCMRDAVSLLDQMLSFGQDRVTLIQVQQVL
GAVNTQTVGEFVAALAERNTAKGLQLIHRLVLDGASLSEFCQQVIEHLRGLMMLQMTNDP
ALLDDLPAETVQQMQVQAKQMDLTATLYAIKRFSAAINELKGGFQPQLPLELALIEVVQG
EVRPATVSAAQEALTATAAAKEQTSSPKPPKQPKASDASATAPSPAETPQLPDQATAEML
RRRWSEFQRLVKQQCGAKVLGALNSAKDTAVGKSTFVFAFTEQYAMVRDMVDTPQTREQL
GHILQQMTGRPFQVVFQIGERAVLPNAPTVSVDNKTADALDPLVEYAIQDLGAQVMQAGH
ESESQQRLSNSSSERLS
NT seq 1674 nt   +upstreamnt  +downstreamnt
atgtccaccgctctataccgtaagtggcgcagccagaccttcgacgaagttgtcgggcag
gagcatgtcacgcagacgctcaaaaatgcgctgcgggatggccgcgtggcgcatgcgtat
ctttttgccggcccgcgcggcaccggcaagaccagcaccgcgcgcattctggccaaggcg
ctgaattgtaccgcccccgaagcagaacgcccctgcaatcgctgtcccacctgccaggcc
atcaccgaaggccgtatgatcgatctgatcgagatcgacgctgcctccaacaacagcgtc
gacgacatccgggagctgcgcgaaaaggtgggatttcgccccagcgaaggccgctacaaa
atctacatcatcgacgaagtgcatatgctgagcggcagcgccttcaacgcgctcctcaag
acgttggaggagccaccgccgcatgcccgcttcatcctggccaccaccgaaccccacaag
atccccgccaccgtcatcagccgctgccagcgcttcgacttccgacgcattccggcgtcg
gagatcgcacgccacctgcagcacatcgtggaggcggaaggtttcgacgctgagccagac
gccctgttgatgatcgcgcgcagcgcgcaggggtgcatgcgcgacgccgtcagcctgctc
gaccagatgctcagcttcggccaggatcgcgtcacgttgatacaggtgcaacaggttctg
ggtgcggtcaatacgcagacggtcggtgagttcgttgctgcgctcgccgaacgcaacacc
gccaaagggctccagctcatccatcgcctggtgctcgacggcgccagcctgtcggaattc
tgccagcaggtgatcgagcatctgcgcgggctgatgatgctgcagatgaccaacgaccct
gccctgcttgacgatctgccagccgagacagttcagcagatgcaggtgcaggcgaagcag
atggacctgacggctacgctgtacgcaatcaaacgcttcagcgctgccatcaacgaactc
aaaggcggttttcagccacaacttccgctggagctggcgctgatagaggtggtgcagggg
gaggtcaggccagcgacagtttcagccgcgcaagaagcgctcacagcaacggcagccgca
aaagagcagacttcatcgccgaagccaccaaagcagcccaaagcctctgacgcctcggct
acggcaccatcgcctgcagagacgccgcagcttcccgaccaggcaacggcggagatgttg
cggcgccgctggagtgaatttcaacggctggtaaaacagcaatgtggcgccaaagtgctg
ggtgcgctcaattcggctaaagacacggcggtcggcaagtccacctttgtctttgccttc
accgaacaatatgccatggtgcgcgatatggtggatacgccacagacgcgcgaacagctc
ggccatatcctgcaacagatgacagggcggccctttcaagtggtctttcagatcggtgag
cgtgccgtgctgcccaatgcgccgacagtctccgtcgacaacaaaacagcggacgcgctc
gatccgttagtggaatatgcgattcaagacctcggcgcgcaggtgatgcaggccggccat
gagagtgagtcgcaacaacgcctttcaaattcttccagtgaacgtttgtcctaa

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