Coffea arabica (coffee): 113702252
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Entry
113702252 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113702252
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
113702252
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
113702252
NCBI-ProteinID:
XP_027079167
UniProt:
A0A6P6TMA7
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Position
7e:19652887..19662064
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AA seq
1158 aa
AA seq
DB search
MTTPPPPPKPLSSQEWETLIEDYNHGRLHRWTTYDYAGPPLVDLALSSILRKDFSLHLKQ
RLLIFLEEHSISLFTSPASLLRLLETLRLVIQSPNPNDAVSLSFSFKEQFLISTTSIFIV
HGTFATADFETLEGLVELLLTIVNRPNHGIDRQTRAVACECLRELELAFPCLLSEIAAHI
WGLCQSERTHAAQSYVLLLAAVIHSIVVYDKAPNVSILNASTPLFPFNVPRIFFENDKDG
DDSDDIVGDDDEKNVSSASSNLKETNVRYKELRRVISFLLEWPQYLTCGGVLEFMRMTMP
VANALELQASLLKVQFSGLIYTFDPLLCHAYLGMYLRLLDSFDGQEMEIANRLVLQSKEL
YLSYQNNVVFQLLSVHWLLGLIQLVIGRDVTKRKSFADVMSLSFYPAIFDPLALKSLKLD
LAAYCSVLLDDFGTLKRYANGGTMTVEVGSEVSVVKLLEDGLMCVSGFKWLPPWSTETAV
AFRTFHKFLVGTSSHSDLNESDSSSKRSPMELPIFCAIQGMLIESTLKFQGLVPLIVSFV
DRLLGCYKHRWLGEWLLETFNESFIPKLNIDYKLGSYFPILERISANERVSPTGLLELLA
NYMVVLIKKHGPDTGLKSWCQGSKILGICRTMMIHHHSSSLFLGLSRLLAFACLYFPDLE
VRDHARTYLRMLVCIPGKKLRDLLNIGEQLPGISPSTNSSSFFNLQSPRYHDPKKSRNIS
SYIHLERTVPLLVRQSWSLSLPVLRLDDDKQSLESFKDNKTTGEPKELDRSSSSIEIVSD
INRISQLQEPLRVMDSKVSEMVGILRKHFASIPDFRHFPGLKIKIPCVLSFDSELFNHSV
GTSIPSDSCGIDSLPAIYATVLKFSSSAPYGNIPSYHIPFLLGQPVKKDYSFSETNSLDI
VPVGNGSAEDKRFKAHVMIELEPREPQPGVINVHIQTNADNSEIIQGQLHSIKVGIEDMF
LKAIVPEDVPTEAVPNYCLDLFNALWEACGTSSSTGRETFVLKGGKGVAAISGTQSVKLL
EVPFMSLIQAVQRCLAPFVVSVTGEPLINIVKGGEIIREVVWKDSDSDSLSEAPNPDARL
DGGPLYIQYMDDENEKGPHLQISKRDMGCFLILIFLPPRFHLLFKMEVCDVSTLVRVRTD
HWPCLAYVDELLEALFIE
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccgccaccgccaccaaagcctctgtcatctcaagaatgggagacattgatc
gaagattacaaccacggccgccttcaccggtggaccacctacgactacgccggtccccca
ctcgtcgacctcgcactctcttctatcctccgaaaggacttctctctccacctaaaacaa
cgtctcctaatcttcctagaagaacactccatttctctattcacttccccggcgagcctc
ttacgcctcctcgaaactctccgtctcgtaatccagtcccccaatccaaatgatgccgtc
tccctctctttctcatttaaagaacagttcctcatttcaacgacttcaatattcatcgtt
catggtacctttgccactgctgattttgaaaccctagagggtttggtggagctgttgttg
acgattgtaaaccgtccgaaccacgggatcgaccggcagacgagggctgtagcttgcgaa
tgtttgcgggagctggaattggcgtttccctgtttgttatcagagattgcggcgcatatt
tggggactttgtcagagcgagagaacccacgcggctcaaagctacgttttgttactcgca
gcggtgattcacagcattgtagtttatgataaggcgcccaatgtttctattcttaatgct
tctacaccactgtttccgtttaatgtgccgcgaattttctttgaaaatgacaaggatggt
gatgatagtgatgatattgttggtgatgatgacgagaaaaatgtttctagtgctagtagt
aatttgaaggagacgaacgtaaggtataaggagttaaggagggtgatttcgtttttgtta
gagtggccacaatacttaacctgcggtggagttttggagtttatgaggatgacaatgccg
gtggccaatgctctggagttgcaagcttctttgctcaaagtacagttttcggggcttatt
tacacgtttgaccctttactctgtcatgcttatttagggatgtatttgaggctcttggac
tcgtttgatgggcaagaaatggaaattgctaatcgactagtgttgcaaagcaaggagcta
tacttgtcatatcaaaataatgtagtttttcaattgctttctgttcactggttattaggt
ttgattcaattggtaataggtagagatgtgacgaagagaaaaagttttgcagatgtgatg
agtctgagtttttatcctgctatttttgatccactggcgttgaaatcattgaaacttgac
ttggccgcttattgctctgttttactcgatgattttgggactctgaagaggtatgcaaat
ggggggacgatgactgtggaggtaggttcagaagtttctgtggtcaaactgcttgaagat
ggcctcatgtgcgtatctggtttcaaatggttgcctccttggagcacagaaactgcagtg
gcgttccgcaccttccataagtttttggtaggcacgtcatctcattctgatcttaatgag
tctgattcttcttccaaaaggtctcccatggagttgcccatattctgtgctatacaggga
atgctgatagaatcaacattaaaatttcaagggttggtacccctgattgtttcctttgtc
gaccgtttattgggatgttacaaacaccgttggctgggcgagtggctgctggagacattc
aatgaatctttcatcccaaaacttaatatagactataaattaggatcttacttccccatt
ttggaaagaatttcggcgaatgagagagtttctccgacagggttgttagagcttcttgcc
aactatatggttgtcctgattaagaaacatggtccagatacagggttgaaatcatggtgt
caggggagcaaaattctgggcatttgtcggactatgatgattcatcaccacagttccagt
ttgtttcttggactttctcgtctccttgcattcgcttgcctttattttcctgatctggag
gttcgtgaccatgcaaggacctacctgcggatgctggtttgcattccaggaaagaagctt
cgcgacttgctgaacattggggagcagcttcctggaatttcaccatctaccaattctagt
tcatttttcaatcttcagtctcctcgctatcatgacccgaagaaatctcggaatatttca
tcctacattcatcttgagcgcactgtgccacttttagttagacaatcatggtccttgtca
ttgccagtgctcagattagatgatgataagcagtcactggaaagcttcaaggataacaaa
actacaggtgagccaaaggagcttgacagaagtagtagtagtatcgagattgtttctgat
attaacagaattagccagcttcaggagccactacgtgtgatggactcaaaagtttcagaa
atggtggggattttaagaaagcattttgcatcaattcctgattttagacacttcccagga
ctcaagatcaaaataccttgtgttttgagctttgactcagagttgtttaatcactcggta
gggaccagcatacccagtgatagctgtggaatagattcacttccagccatatacgccaca
gtgctcaaattttcgtcttctgcaccgtatggcaacattccatcatatcacattcctttt
cttcttggccaacctgtcaaaaaggattactctttcagcgaaactaattcactagatatc
gttcctgttggaaatggttctgccgaggacaaaaggtttaaagctcatgtaatgattgaa
ttagagccccgggaaccacaacctggtgtcatcaatgtacatattcaaacaaatgcggac
aatagtgagatcattcaaggacagcttcacagtatcaaagtgggaattgaagatatgttt
ctcaaagctattgttccagaagatgtcccaacagaagcagtgcctaactattgtctggac
ctgttcaacgccttgtgggaagcatgtggcacatcgtctagcaccgggcgagaaaccttt
gtcttgaaaggaggcaaaggagttgctgcaatcagcggaacacaatcagtgaagctgctt
gaggtacctttcatgtctttgattcaagctgtccagcggtgcttggcaccatttgttgtt
agtgtaactggcgaacctcttattaatatcgtgaaaggtggtgaaataataagagaggta
gtatggaaggattctgattcagattctttatctgaggctccgaacccagatgcgaggttg
gatggaggtcctctttatatccagtacatggatgacgaaaatgagaaagggcctcaccta
caaatttccaaaagggacatgggatgcttcctcatattgatatttcttcctccaagattc
catctcctcttcaaaatggaagtatgtgatgtttctactttagttcgggttagaactgat
cattggccatgtctagcttatgtcgacgagcttttggaagccttatttattgagtga
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