Coffea arabica (coffee): 113703549
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Entry
113703549 CDS
T11342
Name
(RefSeq) meiotic recombination protein SPO11-2
KO
K10878
meiotic recombination protein SPO11
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113703549
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113703549
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
DUF7281
Motif
Other DBs
NCBI-GeneID:
113703549
NCBI-ProteinID:
XP_027080748
UniProt:
A0A6P6TQJ0
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Position
8c:complement(44861078..44863804)
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AA seq
382 aa
AA seq
DB search
MEELWKSSIFFSDQSLCYADILSPPEVRARIEVAVLNFLKVLNAPTPEISDLPLISRKSS
NSRVSRGLLTDVSWIFLSQSFCKRSLMRENSAKSFVRVWMVMKMCYQILLQEKRVTQREL
FYKLLCDSPDYFPSQLQVNGTIQDLVALLRCSRFSLGIMASGRGAVAGRLLLQEPNKEAV
DCSTCGSSGYAISGNLNLLEKLIMKTDARYIIVVEKHAIFQRLAEDCVFNQIPSILITAK
GYPDIATRFFLHRMSRAFPEMPILGLVDWNPAGLAILCTYKFGSIGMGLEAYRYACNVKW
LGMRMDDISQLAPEESLINLKLKDLQIAKSLLSSDVLQDSYKEELATMVESGRRAEIEAL
YFHGYEFLGKYLATKIVQANYI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggaagagctctggaaatcctccattttcttctccgatcaaagcctctgctacgccgat
attctctctcccccggaggttcgagctagaattgaagttgcagtcctcaatttcttaaaa
gttctgaacgctccgacgcctgaaatctccgatcttcctctgattagtagaaagtcgagc
aatagcagagtgagtcgcggattattaacggatgtatcctggattttcttatctcaatcc
ttttgcaagcggtctttgatgagagaaaatagtgccaaatccttcgtcagagtgtggatg
gtgatgaagatgtgttaccagatactgcttcaggagaaaagagtgactcagagagagtta
ttctacaagttgctttgcgattcaccagattatttcccttctcaattgcaggtcaacggg
accatccaagatttagtggcattgcttcgatgcagtcgtttcagccttgggattatggca
tctggcagaggagcggttgctggccgcctattgctgcaggagccaaacaaggaagcagtg
gattgctctacttgtggatcttctggttatgctatttcagggaacctgaatttgttagag
aaattgatcatgaagacggatgctcgttatataattgtagtggagaagcatgctatattc
cagaggctggccgaggactgtgtattcaatcaaattccgagcattctcattacagccaaa
ggatatccagacatcgctacaaggttctttctccatcgaatgagtcgagcatttcctgaa
atgccaatcttagggctcgttgactggaatcctgcgggattagcaatactgtgcacctac
aaattcggaagcataggaatgggcctggaggcttacagatatgcttgcaacgtgaagtgg
ctaggcatgagaatggatgacataagtcaacttgcccctgaagaatctttaatcaatttg
aagcttaaggatcttcaaattgccaaaagcttgttgtcctcagatgtattgcaggatagc
tacaaagaagagttggctacgatggttgaaagtggccggagagcagaaattgaagctctg
tacttccatggatatgaatttctgggaaagtacttggcaaccaaaattgtgcaagccaat
tatatctag
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