Coffea arabica (coffee): 113703726
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Entry
113703726 CDS
T11342
Name
(RefSeq) protein transport protein SEC23 E-like
KO
K14006
protein transport protein SEC23
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113703726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
113703726
Membrane trafficking [BR:
carb04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
113703726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
113703726
NCBI-ProteinID:
XP_071940797
UniProt:
A0ABM4X9S8
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Position
3e:complement(9723967..9734388)
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AA seq
784 aa
AA seq
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MATEMAQMDPEGIDGVRMTWNVWPRTKVELSKCVIPLAASISPIRSHPDVLTLPYPPLKC
KTCTAVLNPFCRVDFQGLVWICPFCFSRNHFPQHYNAISETNMPAELYPQFTTIQYTLPT
LQPIHHHQNPNQNPNFFEPNSAVYLFVLDTCVLEEELEFAKSALKRAIGMLPDNALVGFI
SFGTQVQVHELGFSELSKVYVFRGSKDLTKDQVLEQLGLGVIGAARRPMPGIQRVGGSPV
GMPNPGFSRFLLPASECEYTLNSLLDELGTDRWLVPPGSRSLRCTGVALSVAAGLLGVCA
AGQSARIVALVGGPCTEGPGVIVSKDLSDPVRSHKDLDKDAAPFFKKAVHFYEELAKQLV
SEGHVLDVFASALDQVGVAEMKVAIEKTGGLVVLAESFGHSVFKDSFKRLFEGGEQSLGL
SYNGTLEINCSKDIKIQGVIGPCTSLEKKGPSVASTVVGEGNTTSWKLCGLDRNTCLTVF
FDISSSEKSDPSGSNPQLFLQFLTSYRSPEGQSLLRVTTVTKRWADSALGTEELVQGFDQ
ETAAVIVARFASYKMENEDGFDATRWLDRNLIRLCAKFGDYRKDDPSSFTLNPSFSLFPQ
FMFNLRRSQFVQVFNNSPDETACFRMLLNRESISNSVVMIQPSLMAYSFHSLPTPALLDV
ASIAADRILLLDTYFSVVIFHGMTIAQWRNMGYQNQPEHQVFAQFLQAPQEDAQTIIRDR
FPTPRLVVCDQHGSQARFLLAKLNPSATYNNAHEMAAGTDIIFTDDVSLQVFFEHLQRLA
VQSS
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggagatggctcagatggatccagaaggaatcgacggagttcggatgacgtgg
aacgtctggccacggaccaaagtcgaattgagcaagtgcgtgatcccactcgccgcctcg
atctctccgatccgatctcatcccgacgtcctcaccctcccatacccgccgctcaagtgt
aaaacctgcaccgccgtcctcaacccattttgccgcgtcgatttccaaggtctagtttgg
atctgcccgttttgtttctcgcggaatcattttccccagcattacaacgcaatttcggag
acgaatatgcccgccgagctctacccccaattcaccaccattcagtataccctccccacc
ctgcagccgattcatcaccatcaaaaccctaatcaaaaccctaactttttcgagccgaat
tcggctgtttatttgttcgttttggatacttgtgtcctcgaggaggaattggagtttgcg
aaatcggcattgaaaagggctattgggatgttgcctgataatgctttggttgggtttata
tcgtttgggacgcaggtgcaggttcacgagctggggttttcggaattgtcaaaggtgtat
gtttttagagggtctaaggatttgacgaaagatcaggttttggagcagttgggacttggt
gttattggggcagcacgacgcccaatgcctggaattcagagagttggaggtagccctgta
ggaatgccgaatcccggtttttctagattcctgttgcctgcttctgagtgcgaatatacg
ctcaattcgctattggatgagttggggacggatcgatggctggtgccacctgggagcagg
tcgttacggtgtacaggagttgcattgagtgttgcagctggtttgcttggagtttgcgca
gctggtcaaagcgcaagaattgttgctttagttggtggaccatgtactgaagggccagga
gtgattgtttccaaggatctatcagatccagttcgttcacataaggatttagacaaggat
gctgcaccatttttcaaaaaagctgttcatttctatgaagagctagctaagcagcttgtc
agtgagggtcatgtcttggatgtttttgcatctgctcttgatcaggttggggttgctgag
atgaaggttgccattgaaaaaactggtggacttgttgttttagctgaaagttttggtcat
tcagtatttaaagactctttcaaacgactttttgaaggtggagaacagtctcttggtctt
tcctataatggcacactcgagataaactgttcaaaggacatcaaaatccaaggtgtcatt
ggaccttgcacatctttggagaagaaagggccttctgttgccagtacggttgttggagaa
gggaacactacatcttggaagttgtgtggccttgataggaatacttgcttgactgttttc
tttgatatatcgtcaagtgaaaaatcagatccatcaggatcaaatcctcaattattccta
cagttccttacaagctaccggagccctgaaggccaatcgctgttgagagttacaactgtt
accaaaagatgggcggatagtgctcttggcacagaggagttggtccaagggtttgaccaa
gaaactgctgctgtcatagtggccagatttgcatcttataaaatggagaatgaggatggt
tttgatgccacacggtggttggatcggaatctgattcgtctttgtgccaaattcggtgac
taccggaaggatgacccgtcctcatttacattaaatccctctttttcattgtttcctcaa
ttcatgtttaatctgcggcgttcacaatttgtgcaggtatttaataacagtccagatgag
acagcatgcttccgcatgttgctcaaccgggagagcataagcaactccgttgttatgatt
caaccatcactgatggcatattctttccattcattgcccacacctgctttgttggatgtg
gcatcaattgcagctgatcgtattctgttgttagatacatacttcagtgttgtaattttc
catgggatgacgatagctcagtggagaaacatgggctaccagaatcaaccagaacaccag
gtatttgcacaattcttgcaagctcctcaagaagatgcccagacaattattcgtgatcgg
ttccccacacccagattggtggtttgcgatcagcatgggtcacaggcaagattcctactg
gcaaagttgaacccgtcagctacgtacaataatgcgcatgagatggcagctggaacagac
ataatcttcaccgatgatgtgagtcttcaagtgttttttgagcatcttcagcggctggca
gtgcaatcttcttga
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