Coffea arabica (coffee): 113707018
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Entry
113707018 CDS
T11342
Name
(RefSeq) chaperone protein ClpB4, mitochondrial isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
carb03110
]
113707018
Chaperones and folding catalysts [BR:
carb03110
]
Heat shock proteins
HSP100
113707018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
AAA_28
Mg_chelatase
Zeta_toxin
AAA_7
AAA_18
AAA_24
ABC_tran
NBD_SMAX1
NACHT
Torsin
ResIII
PduV-EutP
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
113707018
NCBI-ProteinID:
XP_027084972
UniProt:
A0A6P6U4I8
LinkDB
All DBs
Position
8c:1027140..1039437
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AA seq
975 aa
AA seq
DB search
MSTSRLSRIALSAALRVSRSNFRPPSICRAAQILSSSSGSSFPPRSVNEFGGVEIPTPSC
FNDVGLSKVFARSYSTVSSSSSGQINNSEFTEMAWDGVVGAVDAARANKQQVVETEHLMK
ALLEQKDGLARRIFTKAGLDNTSVLQAAEEFISQQPKVTGDTSGPILGSSLSSLLDAAQK
HKKDMGDSFVSVEHLLLSFTSDNRFGQMLFRNLQLTEKALRDAVTAVRGSQRVTDQNPEG
KYEALEKYGNDLTELARRGKLDPVIGRDDEIRRCVQILCRRTKNNPVIIGEPGVGKTAIA
EGLAQRIVRGDVPEPLLDRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVTASNGQIILF
IDEIHTVVGAGAVAGALDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALERRFQQV
FCGEPSVEDTISILRGLRERYELHHGVKISDSALVSAAVLAHRYITERFLPDKAIDLVDE
AAAKLKMEITSKPTELDEIDRAVMKLEMEKLSLKNDTDKLSKERLSKIENDLTSLKQKQR
QLNEQWESEKVLMNRIRSIKEEIDRVNLEMEAAERDYDLNRAAELKYGTLMSLQRQLEEA
EKNLADYRNSEQSLLREEVTDLDITEIVSKWTGIPLSNLQQSERDKLVSLEQELHKRVVG
QDMAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGYLFNTENALVRI
DMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVFNILLQ
LLDDGRITDSQGKTVSFRNTVVIMTSNIGSHYILETLRNTENSKEAVYDLMKKQVVELAR
QTFRPEFMNRIDEYIVFQPLDSKQICKIVELQMSRVKERLKLKKIDLHYTQEAVNLLATL
GFDPNFGARPVKRVIQQLVENEIAMEILRGDLKEENSIIVDADTSSRARDLPPQSRLVIT
KMGNNTAIDAMVAND
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtcgaggctcagtagaatagcgctctcggccgcccttagggtctctcgctct
aactttcggccaccgtcaatttgtcgcgctgcccaaatactctcttcttcctcaggtagc
agtttccctcctcgctctgtcaatgaatttggcggtgtggagattccaacaccatcatgc
ttcaacgacgtcggtttgagcaaagtgttcgctcgctcttactccactgtctccagctcc
agctccggccagataaataattcagagttcactgagatggcatgggatggagtagttggt
gctgttgatgcagcacgagccaacaaacagcaggtggtggagactgagcatctaatgaaa
gcactgctagagcagaaggatgggttagctaggaggatattcaccaaggcagggctagac
aatacatcagttctacaagctgcagaggagtttatatctcaacagcctaaggtaacaggt
gataccagtggtccgatactgggctccagtctcagttctctcttggatgctgcacaaaag
cataagaaagatatgggggactcttttgtgtctgtggagcatcttctattatcattcact
tccgataacaggtttggtcagatgttatttaggaatctgcagcttactgagaaagctttg
agggatgctgttactgctgttcgtggaagtcagagagtaactgaccagaatccagaagga
aaatatgaagcacttgagaaatatggcaatgatttaacagaacttgctagacggggtaaa
cttgacccagttattggtcgtgatgatgaaattcgaagatgtgtgcagatattatgtcgc
cgaaccaaaaacaaccctgttattattggtgaacctggggtggggaaaactgcaattgct
gaagggttagctcaaagaattgtgcgcggtgatgttccagaacctttattggatcgcaag
ttgatctccttggatatgggttcattgcttgctggtgctaaattcagaggagattttgaa
gaaaggcttaaagctgttctgaaggaagtcactgcctcaaatgggcagataatattattt
attgatgagatacatactgtagttggtgcaggggctgttgctggagctttggatgctgga
aacttgttaaagccaatgcttggtcgtggtgagctcaggtgcattggagcaaccacattg
aatgaatacaggaagtacattgagaaggaccctgctctagaacgtaggttccaacaagta
ttttgtggtgagccatctgtagaagatactatctccatccttcgtggattgcgtgagcgg
tatgagctgcatcatggggtcaagatttctgacagtgcacttgtgtcagcggcagtcctg
gcacatcgttatataacagagcgttttctgccagacaaagccattgacctagttgatgaa
gctgctgcaaaattgaaaatggagatcacttcgaagcccacagagttggatgagatagat
agggctgttatgaagctagagatggagaaactctctctcaaaaatgacaccgacaaatta
tctaaagaacggttaagcaagattgagaacgatttgacatctcttaagcagaaacaaaga
cagttgaatgaacagtgggagagtgaaaaagttcttatgaatagaatacgctcaattaag
gaggagattgacagagttaaccttgaaatggaagctgctgagcgagattatgacctgaat
cgtgctgctgaactcaaatatgggacactgatgtccctccagcgccaacttgaagaagct
gagaagaaccttgctgactatcggaactctgaacaatctttgctccgggaagaagtgaca
gatcttgatattaccgaaattgttagcaaatggactggcatcccattatcaaatcttcag
cagtctgagagggataagcttgtctctttggaacaggaacttcacaaaagggtagttggt
caggatatggctgtcaaatctgtagctgatgcaatcaggcgctcaagggctggcctgtcc
gacccaaatcggcctattgcaagcttcatgtttatgggtcccacaggtgttggtaaaacc
gagcttgcaaaggcacttgctggttacctattcaatactgaaaatgctctggtgcggata
gatatgagtgaatacatggagaaacatgcagtctctcgattggttggtgcaccaccgggg
tatgtgggttatgaagaaggtgggcaactcactgaagtggtccgtcgtaggccttattca
gttgtgctttttgatgaaattgagaaggcacatcatgatgtttttaacattctattacag
ttgttggatgatggaagaatcaccgattcccagggaaaaactgttagtttcagaaatact
gttgtgattatgacatcaaatattggttctcactatatccttgaaactcttagaaacacg
gagaacagtaaagaggcagtttatgatctgatgaaaaagcaggtggttgagttggctaga
caaacttttaggccggaatttatgaatcgaattgatgagtacattgttttccaacctctg
gattccaaacaaatctgcaaaattgttgaactacagatgagtcgtgttaaggagagactc
aaactgaaaaaaattgacctccattacactcaggaagcagtcaatcttctggcgacactg
ggtttcgatcctaattttggagctcgccctgtgaagcgggtgattcagcaattggttgag
aatgaaattgctatggaaattttaaggggagatctaaaggaggagaactcaatcattgtc
gatgctgatacatcctcgagggctcgagatcttccacctcagagtagattagtaataacg
aaaatgggaaataatactgcaatagatgccatggttgcaaatgactga
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