KEGG   Coffea arabica (coffee): 113707032
Entry
113707032         CDS       T11342                                 
Name
(RefSeq) uncharacterized protein
  KO
K12869  crooked neck
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113707032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113707032
   03036 Chromosome and associated proteins [BR:carb03036]
    113707032
Spliceosome [BR:carb03041]
 Complex B
  Other components
   Prp19-related factors
    113707032
 Complex C
    113707032
Chromosome and associated proteins [BR:carb03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     113707032
SSDB
Motif
Pfam: HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C HAT TPR_14 Suf TPR_19 TPR_16 TPR_CcmH_CycH TPR_2 TPR_8 TPR_17 HAT_Syf1_M U3_assoc_6 UTP6_C
Other DBs
NCBI-GeneID: 113707032
NCBI-ProteinID: XP_071919048
UniProt: A0ABM4VHN6
LinkDB
Position
8c:complement(45247831..45259191)
AA seq 690 aa
MGSMKESDPSLGYLTHKETEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
QKITDPSELADYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQNDFNRARSVWERALEV
DYRDHTMWLKYAEVEMKNKFVNHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQ
IFERWMSWQPDQQGWLSYIKFELRYNEVERARAIFERFVECHPKVNAWIRFAKFEMKNGD
IARARNCYERAVDKLADDEEAEVLFVAFAEFEEKCKEVERARCIYKFALDHIPKGRAEDL
YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDAWFDYLRLEESVGIKERVR
DVYERAIANLPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVYKLCLKVIPHEKFS
FAKIWLLAAQFEIRQLNLQGARLTLGAAIGKAPKDKIFKKYIEIELQLGNIDRCRTLYEK
YLEWSPENCYAWSKYAELERSLAETERARSIFELAIDQPALDMPELLWKAYIDFEISEGE
FERTRALYERLLNRTKHLKVWLSYAKFETSAMEEVEEDLEQKEKCIQRARGVFERALSYF
RTSAPELKEERAMLLEEWLNLESSYGELGNVDLVRVKLPKKLKSSGVTIEEREGKGGLSN
KGLNYSGGSMGKTRDKMFKEKRRRLAFDPP
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgggttctatgaaagaatccgacccttcgttgggctacctaacccacaaagaaacggag
gtgaagctccccaggccaactcgggtcaagaacaaaactccggcgccaatccaaattact
gccgagcaaatccttcgagaagcccgagaacgccaagaagctgaaatccgaccacctaaa
cagaaaattactgacccatccgagcttgctgactaccgtctccgcaaacgcaaagaattc
gaggatttaattcggcgtgtgcgatggaacaaaagtgtctgggtcaaatacgccaagtgg
gaagagtcccagaacgattttaaccgtgcccggtccgtgtgggaacgggccctcgaagtg
gattatcgagaccacactatgtggttgaagtatgctgaagttgaaatgaagaataagttc
gttaatcatgctaggaatgtttgggaccgggcagttacactcttgccccgggttgatcag
ctgtggtataagtacattcatatggaggagatgctcgggaatgttgctggggcgcggcaa
atttttgaaagatggatgagttggcaaccggaccaacagggatggttgtcgtacattaag
tttgagttgaggtataatgaggttgagagggcgcgggcaatctttgagaggtttgtagaa
tgtcatcctaaagtgaatgcttggattaggtttgctaagtttgagatgaaaaatggggat
attgctcgcgctagaaactgttatgagagggctgtggataagttggccgatgatgaggag
gccgaggtattgtttgtagcatttgctgagtttgaagagaagtgtaaagaggtggagagg
gctaggtgtatttacaagtttgcactggatcatattccgaagggtagggctgaggatttg
tatagaaagtttgtagcttttgagaagcagtatggagatagggaggggattgaggacgcc
atcgtgggaaagaggaggtttcagtatgaggatgaagttcggaaaaatccattgaattat
gatgcttggtttgactatttacgattggaagagagtgttgggataaaagagagagttaga
gatgtgtatgagcgagccattgctaacctccctccagctgaggagaagcggtattggcag
agatatatttacttgtggatcaactatgctttgtacgaggagcttgatgctcaggacatg
gagcgtacaagagaagtttacaagttgtgcctcaaggtcattcctcacgagaagttttca
tttgcaaaaatttggttgttagcagcacagtttgaaatccgacagctaaatctccaaggt
gctcgattaacccttggagcagcaattgggaaggctccaaaagataagatttttaaaaaa
tacatcgaaatagagctgcaactgggtaatatagaccgttgccgtacactgtatgaaaag
tatcttgaatggtcaccagagaactgctatgcgtggagcaagtacgcagaactggaaaga
tccttggctgaaacagagcgagcaagatctatttttgagcttgcaattgaccaacctgca
ttagacatgccagagttattgtggaaggcatacattgactttgaaatatcggagggtgaa
tttgaaaggactagagctctctatgagaggctcctaaatcgtacaaaacatttgaaagtc
tggttaagttatgctaagtttgagacatctgctatggaagaagtagaagaagatcttgaa
cagaaggaaaaatgcatccagcgagcaagaggggtttttgaaagagcacttagttacttt
agaacatccgctcctgaactaaaagaggaaagggcaatgctgcttgaagagtggttgaac
ttggagagcagttacggggagcttggcaatgttgatttggtccgcgttaaactgccaaag
aaactcaagagttcgggagtcacgattgaagaaagggaaggcaaaggagggctatcaaat
aaagggttaaattattctggaggttcaatggggaaaactagggataagatgttcaaagag
aaaagaagaaggctcgcctttgatccgccatag

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