Coffea arabica (coffee): 113707032
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Entry
113707032 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K12869
crooked neck
Organism
carb Coffea arabica (coffee)
Pathway
carb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113707032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
113707032
03036 Chromosome and associated proteins [BR:
carb03036
]
113707032
Spliceosome [BR:
carb03041
]
Complex B
Other components
Prp19-related factors
113707032
Complex C
113707032
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
113707032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT
TPR_14
Suf
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_2
TPR_8
TPR_17
HAT_Syf1_M
U3_assoc_6
UTP6_C
Motif
Other DBs
NCBI-GeneID:
113707032
NCBI-ProteinID:
XP_071919048
UniProt:
A0ABM4VHN6
LinkDB
All DBs
Position
8c:complement(45247831..45259191)
Genome browser
AA seq
690 aa
AA seq
DB search
MGSMKESDPSLGYLTHKETEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPK
QKITDPSELADYRLRKRKEFEDLIRRVRWNKSVWVKYAKWEESQNDFNRARSVWERALEV
DYRDHTMWLKYAEVEMKNKFVNHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQ
IFERWMSWQPDQQGWLSYIKFELRYNEVERARAIFERFVECHPKVNAWIRFAKFEMKNGD
IARARNCYERAVDKLADDEEAEVLFVAFAEFEEKCKEVERARCIYKFALDHIPKGRAEDL
YRKFVAFEKQYGDREGIEDAIVGKRRFQYEDEVRKNPLNYDAWFDYLRLEESVGIKERVR
DVYERAIANLPPAEEKRYWQRYIYLWINYALYEELDAQDMERTREVYKLCLKVIPHEKFS
FAKIWLLAAQFEIRQLNLQGARLTLGAAIGKAPKDKIFKKYIEIELQLGNIDRCRTLYEK
YLEWSPENCYAWSKYAELERSLAETERARSIFELAIDQPALDMPELLWKAYIDFEISEGE
FERTRALYERLLNRTKHLKVWLSYAKFETSAMEEVEEDLEQKEKCIQRARGVFERALSYF
RTSAPELKEERAMLLEEWLNLESSYGELGNVDLVRVKLPKKLKSSGVTIEEREGKGGLSN
KGLNYSGGSMGKTRDKMFKEKRRRLAFDPP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgggttctatgaaagaatccgacccttcgttgggctacctaacccacaaagaaacggag
gtgaagctccccaggccaactcgggtcaagaacaaaactccggcgccaatccaaattact
gccgagcaaatccttcgagaagcccgagaacgccaagaagctgaaatccgaccacctaaa
cagaaaattactgacccatccgagcttgctgactaccgtctccgcaaacgcaaagaattc
gaggatttaattcggcgtgtgcgatggaacaaaagtgtctgggtcaaatacgccaagtgg
gaagagtcccagaacgattttaaccgtgcccggtccgtgtgggaacgggccctcgaagtg
gattatcgagaccacactatgtggttgaagtatgctgaagttgaaatgaagaataagttc
gttaatcatgctaggaatgtttgggaccgggcagttacactcttgccccgggttgatcag
ctgtggtataagtacattcatatggaggagatgctcgggaatgttgctggggcgcggcaa
atttttgaaagatggatgagttggcaaccggaccaacagggatggttgtcgtacattaag
tttgagttgaggtataatgaggttgagagggcgcgggcaatctttgagaggtttgtagaa
tgtcatcctaaagtgaatgcttggattaggtttgctaagtttgagatgaaaaatggggat
attgctcgcgctagaaactgttatgagagggctgtggataagttggccgatgatgaggag
gccgaggtattgtttgtagcatttgctgagtttgaagagaagtgtaaagaggtggagagg
gctaggtgtatttacaagtttgcactggatcatattccgaagggtagggctgaggatttg
tatagaaagtttgtagcttttgagaagcagtatggagatagggaggggattgaggacgcc
atcgtgggaaagaggaggtttcagtatgaggatgaagttcggaaaaatccattgaattat
gatgcttggtttgactatttacgattggaagagagtgttgggataaaagagagagttaga
gatgtgtatgagcgagccattgctaacctccctccagctgaggagaagcggtattggcag
agatatatttacttgtggatcaactatgctttgtacgaggagcttgatgctcaggacatg
gagcgtacaagagaagtttacaagttgtgcctcaaggtcattcctcacgagaagttttca
tttgcaaaaatttggttgttagcagcacagtttgaaatccgacagctaaatctccaaggt
gctcgattaacccttggagcagcaattgggaaggctccaaaagataagatttttaaaaaa
tacatcgaaatagagctgcaactgggtaatatagaccgttgccgtacactgtatgaaaag
tatcttgaatggtcaccagagaactgctatgcgtggagcaagtacgcagaactggaaaga
tccttggctgaaacagagcgagcaagatctatttttgagcttgcaattgaccaacctgca
ttagacatgccagagttattgtggaaggcatacattgactttgaaatatcggagggtgaa
tttgaaaggactagagctctctatgagaggctcctaaatcgtacaaaacatttgaaagtc
tggttaagttatgctaagtttgagacatctgctatggaagaagtagaagaagatcttgaa
cagaaggaaaaatgcatccagcgagcaagaggggtttttgaaagagcacttagttacttt
agaacatccgctcctgaactaaaagaggaaagggcaatgctgcttgaagagtggttgaac
ttggagagcagttacggggagcttggcaatgttgatttggtccgcgttaaactgccaaag
aaactcaagagttcgggagtcacgattgaagaaagggaaggcaaaggagggctatcaaat
aaagggttaaattattctggaggttcaatggggaaaactagggataagatgttcaaagag
aaaagaagaaggctcgcctttgatccgccatag
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integrated database retrieval system