KEGG   Coffea arabica (coffee): 113708635
Entry
113708635         CDS       T11342                                 
Name
(RefSeq) probable splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113708635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113708635
Spliceosome [BR:carb03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113708635
 Complex B
    113708635
 Complex C
   U2 SnRNP specific factors
    113708635
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin
Other DBs
NCBI-GeneID: 113708635
NCBI-ProteinID: XP_071920830
UniProt: A0ABM4VMR1
LinkDB
Position
9c:38544044..38554520
AA seq 816 aa
MLGNLPILPLPAPPSDGNLGPVPLAQITEEDEKQNGSQEDLSKADNSNSAPISVATHTRT
IGIIYPPPDIRNIVDKTSQFVAKNGPEFEKRIILQIIASNAGNPKFNFLNASDPYHAYYQ
HRLSEARAQNQVSALQPLQLADSAAPESAAAAPAANGKDATAKPDPSVQFRPVRKILEPP
EAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREINNPQFLFLKPTHSMFM
FFTSLADAYSKVLMPPKALTDKLRKSVTDMTTVLERCLLRLEWERSQEQARQKAEDEIEQ
ERLHMAMIDWHDFVVVETIDFADDEDEDLPPPMTLEEVIRRSKMTGMEEEEIIEPGKEVE
MEMDEEEVQLVEEGMRAASLEENGDLKNNEAKVTIDEAEPPMRIVKNWRRPEERLPAERD
PTKFVVSPITCELIPDNEMSEHIRISLIDPKYKEQKERMFAKIRDTTLAPDDEITKNIVG
LARTRPDIFGTTEEEVSNAVKAEIEKKKDDQPKQVIWDGHTGSIGRTASQAMSQNAGGED
LNEAGNSDMRNLPGPAAPPPPRPGMPSIRPLPPPPGLALNIPRPPNTVQYSTPTGPGVLA
PPPPRPPVVGVLPRPAPHPMSMMPGQQPLMVNRPQMHPSMSMNSPNMPVPPPPGSQFTPL
SAPRPFVPLSMSQPGMPMVPPPSMPQGMPPPPPEEAPPPLPEEPEPKRQKLDDALLVPED
QFLAQHSGPARINVSVPNHDEGNMKGQVLEILVQSLSETVSSLKEKIAGEIQLPANKQKL
SGRPGFLKDNLSLAYYNVAPGETLQLSLRERGGRKR
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgttgggcaatttgccgatattgcctttacctgcacccccttctgatggtaatcttggg
cctgtaccactagctcagataactgaagaagacgagaaacagaatggaagtcaagaggat
ctgagcaaagctgacaactccaactcagctcctatttcggttgcgactcatacgagaact
attggtattatttatcctcctccagatatcagaaacattgttgacaagacatctcagttt
gtggccaagaatggtcctgagtttgaaaagaggattattttacagattattgctagcaat
gctgggaatccaaaatttaactttttgaatgcctctgatccataccatgcgtactatcag
catcgtttatctgaagcccgtgcacaaaatcaggtttctgctctacagccattgcaactg
gcagattcagctgctcctgagtccgctgctgctgccccggctgctaatggcaaggatgcg
actgcaaagcctgatccatcagtgcagtttaggcctgttcgtaaaattcttgaaccccct
gaagcagagcagtacactgttcgcctccctgaagggattacaggggaggagttggacata
attaagcttactgcccagtttgtcgcaaggaatgggaaatcatttttgactggattgacc
agtagggagattaacaatcctcaatttctttttctaaaaccaacccatagcatgtttatg
ttttttacatctcttgcggatgcttattcgaaagtattgatgcctccaaaagcgttaaca
gataagttgagaaagagtgtaactgacatgactacggtgcttgaaagatgccttcttcgc
ttggagtgggaacggtcgcaggagcaggctaggcagaaagctgaagatgagatagaacag
gagcgattgcatatggccatgattgattggcatgactttgttgtagtagagaccatagac
tttgcagatgatgaggatgaagatttgccccctcctatgaccctggaggaggttatacga
agaagcaagatgacaggtatggaagaagaggagatcattgagcctgggaaggaagtagaa
atggaaatggatgaagaggaggtgcagcttgttgaggagggcatgagggcagctagtctt
gaagagaacggggacctgaagaataatgaagctaaggttacaatagatgaagcagaacca
cctatgaggatagtaaagaattggaggagacccgaggagaggctacctgctgaaagagat
ccaactaaatttgttgtgtctccaataacttgtgagctgattcctgacaatgagatgtct
gaacatatcaggatctctttaattgatccaaagtacaaggagcagaaggagaggatgttt
gcaaaaattagggatacaactcttgctcctgatgatgagatcacaaaaaatattgttgga
cttgctcgaacccgtcctgatatttttggtactactgaggaggaagtctctaatgctgtt
aaggcagagatcgagaagaaaaaagatgatcaaccaaagcaagtcatttgggatgggcat
acaggaagtattggtcgtacagcaagtcaggccatgtctcagaatgctggtggagaagat
ctaaatgaagcaggcaacagtgacatgagaaatcttccaggtcctgcagctcctcctcct
cccagacctggcatgccatcaattagacctcttcctccacctcctggacttgccttgaat
atccctaggcctcctaatactgttcagtattcaaccccaactggtcccggtgttttggct
ccacctccacctaggcctccagtcgtcggtgttctgcctagacctgcacctcatccgatg
tcaatgatgccgggccagcaacctctgatggtaaatcgaccccaaatgcatccgtccatg
tccatgaattcccccaacatgcctgtgccaccgccacctggatctcaatttacacctttg
tctgctccgcggccttttgttcccctttccatgtcacaacctggcatgcctatggtccca
ccgccatccatgcctcagggaatgccaccacctccacctgaggaagctcctccaccactt
cctgaagaaccagaaccaaaaagacagaaacttgatgatgctctgcttgttcccgaggac
caatttttagctcaacattcgggacctgctcgtatcaacgtgtctgtgcccaatcatgat
gaaggcaatatgaaagggcaggtgctggagattcttgtgcagtcgctgtctgaaactgtc
agcagcttgaaagagaaaatagctggtgagattcaacttccggctaacaaacagaaactg
agtggaaggcctggttttctcaaggacaatttgtcgctcgcatattataacgttgcaccc
ggagaaacacttcaactctctctcagagagcgtggaggaagaaagagatga

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