Coffea arabica (coffee): 113709923
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Entry
113709923 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113709923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113709923
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113709923
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
113709923
NCBI-ProteinID:
XP_027088568
UniProt:
A0A6P6UCR0
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Position
1e:48710183..48714921
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AA seq
317 aa
AA seq
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MNSDHNHGDSSAFQQHYRCYPVSFIEKSHLEKGDKIIMPPSALDRLAYLQIEYPMLFELS
NPSAGRVSHCGVLEFVADEGLVYIPYWMMENMLLQEGDIVHIKNASLSKGTYVKLQPHTT
DFLGVSNPKAILETTLRNYSCLTTGDTIMVAYNNKKFYIDIVETKPSAAISIIETDCEVD
FAPPLDYKEPEKPEKPSLSNKVPPEVDEEPAKKIPKFNPFSGSSRRLDGRPALQSPPSTF
SPVPKQQHKEDTGGTNVLTSSASTSRQFSGKLVFGSNVENSSSGKQKAASKENNEDSVPK
AEAKFQAFTGKKYSLKD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgatcataatcatggtgacagttcagcctttcaacagcattaccgttgttac
ccagtttctttcattgaaaagtcccatctggaaaagggtgataaaattataatgcctcct
tcagctcttgatcgtcttgcttacctacagattgaatatcctatgttatttgaactgagt
aacccctctgctggtagagtttctcactgcggggtgctagaattcgttgcagatgaaggc
cttgtatacataccttattggatgatggaaaacatgcttctgcaagagggggacattgtg
cacatcaagaatgccagtttgtctaagggaacatatgtgaagttgcagcctcacaccaca
gacttcttaggtgtatccaatccaaaagcaatcttggagacaactttaaggaactactct
tgtttaacaactggtgataccatcatggttgcgtataacaataagaagttttacatcgac
atagtagaaacaaagccctccgcagcaattagcattattgaaactgactgtgaagttgat
tttgcccctcctttggattataaagaaccggaaaagccagaaaagccttccctgtctaac
aaggtgccgccagaagtggatgaagagccagccaagaaaataccgaagttcaacccattt
agtggttcatcaagacgcttggatggaagacctgcattgcagtcacctccatcaactttc
tctcctgtgcccaaacagcagcataaagaggatactggcgggacaaatgttctaacttca
tctgcttctacctcacgccagttttcggggaaacttgtttttggttcaaatgtggaaaat
tcttcaagtggaaaacaaaaagctgcctcaaaggagaacaatgaagattctgttccgaag
gctgaagcaaaattccaagcattcacagggaagaagtattcactgaaagactaa
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