Coffea arabica (coffee): 113717918
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Entry
113717918 CDS
T11342
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial-like
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
113717918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carb03400
]
113717918
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
113717918
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
113717918
Prokaryotic type
113717918
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF1643
Motif
Other DBs
NCBI-GeneID:
113717918
NCBI-ProteinID:
XP_027098565
UniProt:
A0A6P6V7B3
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Position
11e:49589763..49596016
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AA seq
342 aa
AA seq
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MAASSKTIMDLFKQPAAKRLKRVSSPAPPTSTPTPTKLAAFCSSSSSPIDGGKHDQNDVA
SSNPHPSLLEPSSTPPSILTAEEKSRIEFNKALARARRNLKLCSDKIAKCEDVGCVKLEE
LLVEETWLGKLPGEFQKPYAKNLFKFVESEIQRSGFPIYPPQHLIFNALNTTPFDRVKVV
IIGQDPYHGPGQAMGLSFSVPEGVKVPSSLVNIYKELQNDLGCSIPSHGNLERWAVQGVL
LLNAVLTVKQSQANSHANKGWEQFTDAVIRTISQEKKGVVFLLWGNYAQAKARLIDETKH
HILKAAHPSGLSANRGFFGCRHFSRTNQILEKMGISPIIWQL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggcatcctcaaagacgataatggacctattcaaacaacccgctgccaagcgtctc
aagcgagtctcttctcctgctcctccgacttcgactccgactccgacgaagctcgctgct
ttctgctcttcatcgtcctcaccgatagacggcggtaagcatgatcaaaacgacgtagct
tcgtcaaatccccacccgagtttactcgaaccaagttctactcctccttccattcttacc
gccgaagagaagtccaggatcgaattcaacaaagccctcgccagagccagacgaaacctt
aagctctgctccgacaaaattgccaaatgtgaggatgtaggatgtgtgaagttggaggag
ctgttggttgaagaaacctggctgggaaagttaccaggggaatttcaaaagccatatgcg
aaaaatctgtttaaatttgtggagagtgaaattcaaaggagtggttttccaatttatcct
ccgcaacatctgatctttaatgctctcaatactactcctttcgatcgagtgaaagtcgtt
atcattgggcaggatccatatcacggacctggtcaggcgatggggctctccttctctgtg
cctgaaggtgttaaagtcccttcgagtctggtaaatatatataaggagcttcagaatgat
ttgggctgttcaattccttcgcatgggaacttggagagatgggctgtacagggggttcta
ctgctgaatgctgttctgacagttaaacagagccaagcaaattcccatgcaaacaaaggt
tgggagcaatttactgatgcagtcatcaggacaatttcacaggagaagaaaggtgttgtt
tttcttctctggggtaattatgcacaagcaaaagccaggttgatcgatgaaacaaagcat
cacattctcaaggcagcccatccatctggtttatctgcaaatcggggcttctttggctgc
aggcatttctctcggacaaaccagattttggagaaaatgggaatttctcccattatttgg
caactatag
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