KEGG   Coffea arabica (coffee): 113727023
Entry
113727023         CDS       T11342                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
carb  Coffea arabica (coffee)
Pathway
carb03020  RNA polymerase
carb03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    113727023
  09124 Replication and repair
   03420 Nucleotide excision repair
    113727023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:carb03021]
    113727023
   03400 DNA repair and recombination proteins [BR:carb03400]
    113727023
Transcription machinery [BR:carb03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     113727023
  RNA polymerase III system
   RNA polymerase III
     113727023
  RNA polymerase I system
   RNA polymerase I
     113727023
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      113727023
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG PNK3P PFU
Other DBs
NCBI-GeneID: 113727023
NCBI-ProteinID: XP_027106780
UniProt: A0A6P6VW45
LinkDB
Position
2c:complement(24642113..24648085)
AA seq 144 aa
MVKFHFDDIIEVQDVNVEGKKYDKVSRVDAKSEDGEIYMQLDVNSELYPMHPKEKYRMVL
SETLNLDGTAVTSHSEAKQKSLADKFEYVMHGLLYKISEEKAKAGVKVVVYISFGGLQLM
VRGAPIKMHRYKVDQRLFLLLRKI
NT seq 435 nt   +upstreamnt  +downstreamnt
atggtgaaatttcattttgatgacatcattgaggttcaggatgtgaatgttgagggcaaa
aagtatgacaaagtttctcgtgttgatgcaaagagtgaggatggtgagatctatatgcag
ctagatgtgaactccgagttataccctatgcatccaaaagaaaaatacaggatggtgtta
tctgagactttgaacttagatgggacagctgttacaagccattctgaggccaagcagaag
tctcttgcagacaaatttgagtatgtcatgcacggcctgctgtataagatctcggaggag
aaagcaaaagctggtgtaaaagtggtcgtgtatatatcatttggagggcttcagctgatg
gtaaggggtgctcccataaagatgcatagatacaaggttgatcaaaggttgtttttactc
ttgaggaagatttaa

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