KEGG   Coffea arabica (coffee): 113730603
Entry
113730603         CDS       T11342                                 
Name
(RefSeq) cell division cycle 5-like protein
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
carb  Coffea arabica (coffee)
Pathway
carb03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:carb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113730603
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:carb03041]
    113730603
   03400 DNA repair and recombination proteins [BR:carb03400]
    113730603
Spliceosome [BR:carb03041]
 Complex B
  Other components
   Prp19 complex
    113730603
 Complex C
   Prp19-CDC5 complex
    113730603
DNA repair and recombination proteins [BR:carb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    113730603
SSDB
Motif
Pfam: Myb_Cef Myb_DNA-binding Myb_DNA-bind_6 TPR_HPS5_insect DUF7073
Other DBs
NCBI-GeneID: 113730603
NCBI-ProteinID: XP_027111204
UniProt: A0A6P6W7C6
LinkDB
Position
2e:complement(7536111..7541217)
AA seq 905 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEAGDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDVRQRKRKRRGIDYNAEIPFEKKPPPGFYDVTDEDRPVEQPKFPT
TIEELEGERRVDREARLRKQDAARNKIAERQDAPSAIMQANKLNDPEAVRRRSKLNLPAP
QIPDHELEAIAKIGIASDIIGSEELTEGNAATRALLASYAQTPQGGMTPLRTPHRTPAGK
QDAIMMEAENQRRLSQSQTPLLGGDNPILHPSDFSGVTPRKKEIQTPNPLLTPSATPGGP
GLTPRIGMTPSKDGYSFGTTPKGTPIRDELRINEDMEMHDSVKLRQADSRKELLSGLKNL
PQPKNEYQIVTQPIPEDNEEPEEKIEEDMSDRLAREKAEEEARQQALLKKRSKVLQRELP
RPPGASLDLIRTSLIRSDEDKSSFVPPTLIEQADEMIRKELLSLLEHDNAKYPHDEKVKK
EKKKGTKRKAASVPVIEDFEENEMKEADSLIKDEAEFLRLALGHESASVDEFVEVHKTCL
DDVMYFPNRRGYGLSSVANNMEKLAALQNEFECVKKTMDDDTKKAQGLERRIKVLTDGYQ
MRAGKLWSQVEAIYKQMDTAETELKCFQALQVQEHLAASNRINTLWEEVQKQKELESTLQ
KRFGDLLAQKEKIQNLLEEHRAKAQVQEEIAAENAAPELPKDEDSSIGNETMDVDVIPEV
APPSSSDTNEVPEIVKEQLGEARGELSSKAFVEEDHADVSDVKPQRGMNGPVQGTEEVVD
ASVTA
NT seq 2718 nt   +upstreamnt  +downstreamnt
atgaggattatgataaagggaggtgtttggaaaaacaccgaagatgaaatcctcaaggcg
gcggtgatgaaatatgggaaaaatcaatgggcccgaatctcctcgcttttagttcgtaaa
tcggctaaacaatgcaaagctcgctggtatgagtggctcgatccttctatcaagaagact
gagtggacgagagaagaagatgagaaactgttacatcttgcaaagctcatgcccacccag
tggagaacgattgctcctattgttggtcgtactccatctcagtgtctggaacgctatgag
aaactccttgatgctgcatgtgcgaaggacgagaactatgaggcaggagatgatcctcgc
aaattgcgtcctggagagatcgatccaaatccagaatcaaagcctgcccgtcctgacccc
gtggacatggatgaggacgagaaagagatgctttcggaagcacgagctcggttagccaac
accagaggtaaaaaggctaaaaggaaagcaagggagaagcagcttgaagaggctcgaagg
cttgcttcactgcagaaaaggagagagctaaaggctgctggaatcgacgtgcggcaaagg
aagagaaagaggaggggaatcgattacaatgccgaaattccctttgaaaagaagcctcct
ccgggcttttatgatgttacagatgaagatcggccagtggagcaaccgaaattccctact
accattgaagaacttgaaggtgaaagaagggttgatagggaagctcgtctgaggaagcag
gatgctgcgagaaacaagattgcagagagacaggatgctccttcagctataatgcaagca
aacaagcttaatgatccagaggcagtaaggaggagatcaaaattaaatcttcctgcacca
caaattccagatcatgaattggaggcaattgcaaaaattggtatagctagtgatattata
gggagtgaggaacttacagaaggtaatgctgccactcgagccctccttgcaagttatgcc
cagacaccacaggggggaatgactccattaagaacccctcacagaacacctgctggtaag
caggatgccataatgatggaggcagaaaatcagaggaggttaagtcaatctcagacacct
ttacttggaggagataaccccatacttcacccctctgatttctctggagtcactccaagg
aaaaaggaaatccaaacaccaaatccacttttaactccttcagcaactcctggaggccca
ggccttacgcctagaattggcatgacaccttcaaaggatggatattcttttggtacaaca
ccaaaaggaactccaattagagacgagctgcgcataaatgaagatatggagatgcatgac
agtgttaagctgagacaagctgattccaggaaggaactgctctctggtctgaaaaatctt
ccacagcccaagaatgagtaccaaattgtcacccagccaattcctgaagataatgaagag
cctgaggagaagattgaagaagacatgtctgacaggttagctagggagaaggctgaggag
gaagctaggcaacaagcattgctgaagaaaagatcgaaagtacttcagagggaactacct
agacctcctggtgcttcactggatttaatcagaacttcactaataagatctgatgaagac
aagagctcttttgttcctccaacgttaattgagcaggctgatgaaatgataagaaaggaa
cttctgtctttgctagagcatgataatgcaaagtatccacatgatgagaaagtgaagaag
gagaagaagaaaggaacaaaaagaaaggctgcttctgtacctgtgattgaagattttgaa
gaaaatgaaatgaaagaggctgatagcttgataaaagacgaggctgagtttcttcgtcta
gcattgggacatgagagtgcttctgttgatgaatttgtcgaagttcataaaacatgctta
gatgatgttatgtatttccctaatcgaagaggctatgggctttccagtgttgctaacaac
atggagaagcttgctgctttacagaatgaatttgagtgtgtaaagaagacgatggatgat
gacaccaagaaagcacagggtcttgagcgaaggataaaagttcttacagatggttatcag
atgagagctgggaagctatggtcgcaagttgaagccatctataagcagatggatactgca
gagactgagcttaaatgcttccaagctttgcaggtgcaagagcacttggctgcatcaaac
aggataaatactctgtgggaagaagttcagaagcagaaggagctggagagcaccttacag
aaaaggtttggggaccttctggcacaaaaagagaagattcagaatctcttggaggaacac
agagcaaaggcacaagtacaagaagaaattgcagcagaaaacgcggcccctgagttgccc
aaagatgaggattcttcaattggaaatgagaccatggatgttgatgtgatcccagaagtt
gcacctcctagctcaagtgacacaaatgaggttcccgaaatagtgaaggaacagttgggg
gaagctagaggagaattaagttccaaagctttcgttgaggaagatcatgcagatgtatct
gatgttaaaccccagcgaggtatgaatggtccggtccaagggacagaagaagtcgtggat
gccagcgttactgcgtga

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