Coffea arabica (coffee): 113730835 Help Entry 113730835         CDS       T11342                                  Name (RefSeq) tyrosyl-DNA phosphodiesterase 1   KO K10862   tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-] Organism carb  Coffea arabica (coffee) Pathway carb03410   Base excision repair Brite KEGG Orthology (KO) [BR:carb00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     113730835  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:carb03400]     113730835 DNA repair and recombination proteins [BR:carb03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      113730835 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tyr-DNA_phospho FHA Motif Other DBs NCBI-GeneID:  113730835 NCBI-ProteinID:  XP_071934945 UniProt:  A0ABM4WT42 LinkDB All DBs Position 2e:complement(9973368..9981262) Genome browser AA seq 660 aa AA seqDB search MSISNSPRVGFLQPLNKVGQEESSIPKILLSKGLNVVGRNCIPVTDKRLSRKHLSINVAS DGSSEVSVEGTNPVVLRTKGERKKLLSGEKWKIEDGDIIELIPGHYFFKYVASGGEKNEK LMSNKQKRCWDEESSYSKDRVRNKKRINGESELEPLAEQSKKKRFENNGKETDKSSEGIR QFNVPNSKLPSTFRLLRVQGLPAWANTNTVSINDVIQGNVILAILSNYMVDIDWLLSACP LLKKVPNVLVIHGESDGILEYMKRKKPASWILHKPPLPISFGTHHSKAMLLVYPQGVRVV VHTANLIHVDWNNKSQGLWMQDFPWKDNNGASKGCGFESDLIDYLTMLKWPEFNVDLPAL GSYSIKPSFFKKFDYTSAVVRLIASVPGYHSGSNLKKWGHMKLRTVLQECTFSEEFQKSP LVYQFSSLGSLDEKWMLEFASSMSAGVTRDKKPLGVGEPLIIWPTVEDVRNSLEGYAAGN AIPSPLKNVEKAFLKKYWAKWKANHSGRCRAMPHIKTFTRYNGQNLAWFLLTSANLSKAA WGALQKGNSQLMIRSYELGVLFLPSSIKPGCGFSCTDIAKSSDDNGGLQKSSETKRMKLV TLNWQGDQTEVIQLPVPYELPPKPYSREDVPWSWDRHYAEKDVYGQVWPRQVKLYACQDS NT seq 1983 nt NT seq  +upstreamnt  +downstreamnt atgagtatatccaactctcctcgggtgggatttctgcagccattgaacaaagtagggcaa gaagagagctcaattcccaaaatattactatctaaagggctcaatgttgttggccggaat tgcattccagtcactgataaacgcctcagccggaagcatctcagcattaatgttgcctcc gatggctctagcgaagtctctgtggaaggaacaaaccctgttgttctaagaactaagggt gaaaggaagaagcttttatctggagagaaatggaaaattgaggatggtgatattatagag ttgatacctggccactacttttttaagtatgtagcttctggtggtgagaaaaatgaaaag ttaatgagtaataagcagaaaaggtgttgggatgaagaaagtagttatagcaaagacagg gttcgtaataagaagagaatcaacggtgaatctgaattggaacctctggctgaacaatca aaaaagaaacggtttgagaataatggcaaggaaacagataaatcttcggagggtattcgt caatttaatgttcctaattctaagttaccgtcaacttttcgattattacgggtgcaaggg ctgccagcatgggctaatactaacacggtctcaatcaatgacgtgattcagggaaatgtt attcttgctatactttctaattacatggtggacatcgattggctactttctgcatgtcct ctgcttaaaaaagtgcctaatgttttggtcatccatggagagagtgatggcatactggag tacatgaagagaaaaaagcctgcaagttggatccttcacaaacctccattaccaatttca tttggaacacatcattccaaagctatgcttcttgtctatcctcaaggagtaagggttgtt gtgcatacggcaaatttgatacacgttgattggaataacaagagccaaggcctgtggatg caagattttccgtggaaggataataacggtgcaagcaaaggatgtggttttgaaagcgat ttaattgattatctgaccatgttaaagtggccagaattcaatgttgatttacctgctctt ggcagttacagtattaagccttcattcttcaaaaagtttgattacaccagtgcagtggtt aggctaattgcatcagtccctggatatcattcaggttccaatttaaaaaagtggggacat atgaagttacgtactgtgcttcaggagtgtactttcagtgaggagttccaaaaatctcct cttgtttaccagttttcttccctaggttctttggatgagaagtggatgttggaatttgca tcatctatgagtgctggagttacaagagataaaaagccccttggggtaggggagccatta ataatatggccaacagtggaagatgtcagaaattctttagagggatatgcagctggaaat gccattccaagtccactaaagaatgtggagaaagcatttctgaaaaaatattgggcaaaa tggaaggctaaccatagtggtcgctgtcgtgcaatgcctcacataaagacattcacgcgg tataatggccaaaatcttgcgtggttcttgctcacttcagccaacctcagcaaagctgcc tggggggctcttcagaaaggcaattcccagctgatgatccgttcctacgagcttggagtg ctctttttgccttcttccattaaacccggttgtggattttcttgtacagatattgcgaag tcctctgatgataatggtggactgcagaagagttctgaaacgaagagaatgaagctggtg actctaaattggcaaggagaccaaactgaagtgatacagttgcctgttccttatgagctt ccaccaaaaccctattcccgggaagacgttccttggtcttgggatcgtcattatgcagag aaggatgtttatggtcaagtatggcctagacaagtaaagttgtatgcctgccaagattcc tag

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