Coffea arabica (coffee): 113734233
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Entry
113734233 CDS
T11342
Name
(RefSeq) NPL4-like protein 2
KO
K14015
nuclear protein localization protein 4
Organism
carb Coffea arabica (coffee)
Pathway
carb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113734233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
113734233
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
113734233
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Ortholog
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GFIT
Motif
Pfam:
NPL4
UN_NPL4
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
113734233
NCBI-ProteinID:
XP_027116448
UniProt:
A0A6P6WLZ7
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Position
1e:57100022..57103957
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AA seq
412 aa
AA seq
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MMLRIRSRDGLERLKIENPQSTIGELKSQIESQLRVPTQSQTLSTNQNLLLAKTLDDLSR
FTDMSNPQTPLSSLSLTHGSIIFLAYDGERTVAGGPLVNPAGSFGKKMTMDDLIAKQMRV
TRQEVSHCELVSFDRDAANAFQHYVNDTLAFAVKRGGFMYGTVSPEGKVEVDFIYEPPQQ
GTDENLILLRDPDEEKLVEAIAAGLGMRKVGFIFTQTISQDKKDFTMSNAEILQAAELHA
EGDLKEWVTAVVKLEVNEDGLANVHFEAFQMSDMCIRLFKEGWFETVIPEGLDPKLSRMK
KDVVVGVKDTKEVDNDFFLVVVKIFDHQGPLSSTFPIENRNDPVTMKALRNHLDRAKNLP
FVKRISDFHLLLLLARFLDINADVPALAECVQTRSAVPEGYQLLIESMASAS
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgctacgaattcgaagcagagatgggctggaaagactcaaaatcgaaaacccacaa
tccacaatcggcgaactcaaatcccaaatcgaatcccaactccgggttcccacccaatcc
caaaccctctccaccaatcaaaacctcttgttggccaaaaccctagatgatctctccagg
ttcaccgacatgtccaatccccaaaccccactctcctccctcagcctcacccacggctcc
atcatttttctcgcctacgacggcgaacgcaccgtcgccggtggtcccctcgtcaacccc
gccggctccttcggcaagaagatgaccatggatgaccttatcgctaagcaaatgcgggtt
acccgccaagaggtttctcactgtgaattagtgtctttcgatcgcgacgccgctaacgct
ttccagcattatgtaaacgataccctggcttttgcggtgaagcgcgggggttttatgtac
ggaacggtgtctccggagggaaaagtggaggtggattttatatacgagccgccgcagcag
gggacggatgagaatttgattctcttgcgcgatccagatgaggaaaaactggtggaagcg
atagctgctgggttggggatgaggaaagtgggatttatatttacgcagaccattagtcag
gacaagaaggatttcaccatgtccaatgccgagattttgcaggctgctgagctgcacgct
gagggcgatttgaaggagtgggtcacggcggtggtgaagctggaggtgaatgaagatggg
cttgctaatgtgcattttgaggcgtttcagatgagcgatatgtgcattaggttgttcaag
gaaggatggtttgagacagtaattccggaagggcttgatccgaagctatctagaatgaaa
aaggatgttgtagtcggagtgaaagatactaaagaggttgacaatgacttcttcttggtc
gttgtcaagatttttgatcaccagggtcctctttcatcaacatttccaattgagaacaga
aatgatcctgtcaccatgaaagctttgagaaaccatctggaccgagcaaagaacctccca
tttgtgaagcgaatatctgacttccatctgctactcttgctggctaggtttttggacatc
aatgctgatgtccctgcattggctgaatgtgtccagacacggtcagctgttcctgaaggt
taccagcttctaattgaatcaatggctagcgcatcctga
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