Coffea arabica (coffee): 113743761
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Entry
113743761 CDS
T11342
Name
(RefSeq) meiotic recombination protein SPO11-1-like
KO
K10878
meiotic recombination protein SPO11
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
113743761
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
113743761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
113743761
NCBI-ProteinID:
XP_027127642
UniProt:
A0A6P6XNG8
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Position
5e:complement(53596941..53601497)
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AA seq
365 aa
AA seq
DB search
MEGKRSSLSISIPSDLLRRIRELTLSILTNLSNGQSPVVQIDRFRNYCTETSGNCYCNCG
ISVGKELLTLQRECHTRRLDVLLRVLLVVQTLLQQNRHGSKRDIYYMHPTVFKEQSVVDR
AINDICILLQCSRHNLNVVSVGNGMVMGWLKFSEAGRKFDCINNPNTAYPVPVHVEDVEI
DIIGVARYILVVEKESVFQRLANDSFCTRNRCIVVTGRGYPDVPTRRFLRLLIEKLHLPA
YCLVDCDPYGIDILTTYRFGSMQMAYDAKFLCVPEIRWLGVFPSEVEKYCLPQQCLLPLT
REDKTRVEAMLLRCYLRREAPQWRFELDLLLSRGLKCEIEALSVQSLSFLSEEYLPSKIQ
GGVYI
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggagggaaagcgttcgtccttgagcatttccataccctccgacttgctcagaagaatt
agagagctgacgttatcgatcctcacgaatctttccaatggacaatcgccggtcgttcaa
attgatcgattccgaaactactgcaccgaaacttctggaaactgctactgcaattgtggt
atatctgtggggaaggagctattgacgttgcagagagaatgtcatactcgtagactggat
gtcttgcttcgagtgctgcttgtagttcagacacttctgcaacaaaacaggcatggttcg
aaaagggatatttactacatgcatcctacagttttcaaagagcagtctgttgttgaccga
gcaattaatgacatttgcattcttctgcagtgcagtcgtcacaacttaaatgtggtatct
gttggaaatggaatggttatgggttggctcaaattttcagaagctgggaggaaatttgat
tgcatcaacaatcctaacacggcttatcctgtgcctgttcacgtggaagatgtcgaaata
gatataattggtgttgctcggtatatattagttgtcgagaaagaatcagtattccagaga
ttagcgaatgattctttttgcacaagaaaccgttgcattgtggtcacaggaagaggctat
cctgatgtgccaacgagaagatttttgcgcctccttattgaaaagctgcatctgcccgcc
tattgtttggtagattgtgatccttatggcattgatatcttgacaacttacagatttggt
tctatgcaaatggcctatgatgcaaaatttctatgcgttccagagataaggtggcttggt
gtttttccatccgaagttgagaagtattgccttcctcaacagtgtctgctacctttaact
agagaagataagactagagttgaagcaatgttactaaggtgttacttgcgacgcgaagca
cctcagtggaggtttgaactggacttgctcctttctcgaggactcaaatgtgagatagaa
gcattatcggtgcagtcactttcattcttgtctgaggagtatcttccatccaagatccaa
ggaggagtctacatctaa
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