Coffea arabica (coffee): 140009271
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Entry
140009271 CDS
T11342
Name
(RefSeq) DNA topoisomerase 6 subunit A-like
KO
K10878
meiotic recombination protein SPO11
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
140009271
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
140009271
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GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
140009271
NCBI-ProteinID:
XP_071910460
UniProt:
A0ABM4UT50
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Position
6e:complement(2535047..2536560)
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AA seq
419 aa
AA seq
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MADKKKRRRPADPDSDSIPFKSKLKPDSVILQALKALAAAESTPSASTNPLTLADLSLSQ
ACREVSDLPLSSVQSTIESLVLSLTHSILSGQGLSFSVPSRSSANQLYVPELDRIVLKDK
SSLRPYANVSTVRKTTITARILQLIHQLCLKSIHVTKRDLFYTDVKLFQDQTQSDAVLDD
VSCILGCTRSSLNVIAAEKGVVVGRLIFSDNGDLIDCTKMGMGGKAIPPNIDRVGDMQSD
ALFILLVEKDAAYIRLAEDRFYNRFPCIIITAKGQPDVATRLFLRKLKTELKVPVLALVD
SDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKYNIPEQCRLPMTEQDIK
TGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYLSEVYLPLKLQQEDWL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaagaaaaagcgccgccgaccggcggaccctgactccgactcaatacccttc
aagtccaaactcaaacccgattccgtcatcctccaagccctcaaagccctagcagcagca
gaatccaccccctccgcctctaccaatcccttaaccctcgccgacctctctctttcccaa
gcatgccgtgaggtcagcgacctccctctgtcctccgtccagtcaactattgaatccctc
gtcctcagcctcacccactccatcctctccggccagggcctctccttctccgtcccctct
cgttcctccgccaaccaactctacgtccccgaactcgaccgcatcgtcctcaaagacaag
tcctccctccgtccctacgccaatgtctccaccgtccgcaagaccaccatcaccgcccgc
atcctccagctcatccaccagctctgcctcaagagcatccacgtcactaagcgtgacctc
ttctacacagacgtcaagcttttccaagaccagacacaatccgacgccgtcttggatgac
gtctcctgcatcttgggctgcaccaggtccagcctcaatgtgattgccgccgaaaagggg
gtggttgttggccggcttatttttagcgataacggtgatttgatcgactgcaccaagatg
gggatgggcggaaaagcgattccccccaatatagacagggtcggggatatgcagagtgat
gcattgtttattctgttggtggagaaggatgctgcttatatcaggttagctgaggatagg
ttctataatcggttcccgtgcataatcatcacggccaaaggacaaccggatgtggcaacc
aggctgttcttgaggaaactgaagacggaattgaaggtgccggtgttggctttggtggat
agtgatccttacgggttgaagatcttgtcggtttacgggtgtggatccaagaatatgtct
tacgacagcgcaaatttgacgacccctgatattaagtggttggggattaggccgagtgat
ttggataagtataacataccggagcagtgcaggttgccgatgacagagcaggatatcaag
actgggaaggatctgttggaggaagattttgtgaaaaaaaatcctgggtgggttgaggag
ttaaatttgatggtgaagactaagcagaaggctgagattcaggccttgagctcgttcggc
tttcagtatttgtccgaggtctatctgcccctgaaactgcagcaggaggattggctctga
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