Coffea arabica (coffee): 140012947
Help
Entry
140012947 CDS
T11342
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
carb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140012947
09124 Replication and repair
03420 Nucleotide excision repair
140012947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
140012947
03400 DNA repair and recombination proteins [BR:
carb03400
]
140012947
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
140012947
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
140012947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
DUF1108
Motif
Other DBs
NCBI-GeneID:
140012947
NCBI-ProteinID:
XP_071917727
UniProt:
A0ABM4VDX3
LinkDB
All DBs
Position
8e:49820358..49822371
Genome browser
AA seq
70 aa
AA seq
DB search
MVNAIKGLMISCDVPMAQFIINMNAALPQSQKFIIHVLDNTHLFVRSDVAGMIRSAIAEF
REQNTYEKPS
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgccatcaagggactgatgatttcatgtgacgtacccatggctcaattcatc
atcaacatgaatgcagcactacctcaatcacagaagtttattatacatgttttagataac
actcatctctttgtacgatctgatgttgctggaatgataagatcagccattgcagaattc
agggagcagaatacttatgagaagccttcttaa
DBGET
integrated database retrieval system
