Collimonas arenae: LT85_0020
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Entry
LT85_0020 CDS
T03512
Name
(GenBank) Modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
care
Collimonas arenae
Pathway
care00270
Cysteine and methionine metabolism
care01100
Metabolic pathways
Module
care_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
LT85_0020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_0020
03032 DNA replication proteins [BR:
care03032
]
LT85_0020
03036 Chromosome and associated proteins [BR:
care03036
]
LT85_0020
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
care02048
]
LT85_0020
Enzymes [BR:
care01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
LT85_0020
Transcription factors [BR:
care03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
LT85_0020
DNA replication proteins [BR:
care03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
LT85_0020
Chromosome and associated proteins [BR:
care03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
LT85_0020
Prokaryotic defense system [BR:
care02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
LT85_0020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AIY39180
UniProt:
A0A0A1F5W4
LinkDB
All DBs
Position
complement(37086..38615)
Genome browser
AA seq
509 aa
AA seq
DB search
MPINIVDLFAGPGGLGEGFSSLSKGNAFRILISAEMESSAHKTLRLRSFFRLIRHDARSL
SGYYEFCNGDAKLPYNTRSQSAWEESGLEARQLTLGNPNDNRVLDAVLDQKLQEQEPWVL
IGGPPCQAYSLVGRSRNIGTPSYRPEDDHRHFLYKEYLRIIRDRRPPVFVMENVKGILSS
RVAGKTIFHDILRDLADPDGVFGVSSLRPGYRIHSLVTNTFFESGMDPNAIDPRDFIVKS
EDFGIPQARHRVILLGVRTDIDANFKRLVAQPTVHVREVIRDLPPLRSKLSNGDDSARNW
SITVKNHLVELAEEALDKNMDRLSAHLKRYSKQVRVGLSPGALHCPKSALSREVPYYTDW
YLDSKLRFWLNHESRSHMTSDLRRYGYAAAYAALNDRSPKGHEEFSLAGLAPNHENWESG
KFADRFRVQRYDAPASTITSHIAKDGHYFIHPDPAQCRSLTVREAARLQTFPDNYFFQGN
RTQQYHQVGNAVPPLLAKMIAQIVKEILT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaatattgtcgatctgttcgccggccccggaggactcggagaaggattctct
tccctatcaaaaggaaacgcgttccgaattttaatttctgcggaaatggaatcctccgcc
cataaaacacttcgactccgcagcttcttccggctcatacgtcatgatgctcgctctctc
tccgggtactacgaattctgcaatggcgacgctaaactaccctacaacacccggtctcaa
tcggcgtgggaagagtctggattggaagcaagacagcttacactgggaaatccaaacgac
aaccgtgtgcttgatgcagtgctcgatcaaaaattgcaagaacaagagccatgggtgcta
atcggcggccctccttgccaagcttactcattggttggacgctcaaggaatatcgggaca
cctagttatcgcccagaggatgatcatcgacattttctctataaagaatatttacgaatc
attagagatcgtcgaccacctgttttcgtaatggagaatgtgaagggcattctatcttcc
cgggttgctgggaaaacgattttccatgacattttacgagatctcgcggaccccgatggt
gtgttcggagtatcgagcctacgtccaggctatcgcattcactctctggtaacaaatact
ttcttcgagagtggaatggatcccaacgcaatcgatccgcgtgatttcattgtcaaatct
gaagatttcggcattccgcaggcgcgccatcgtgtcatcctccttggggttcgcaccgat
atcgacgcgaatttcaagcgcttagtcgctcagccaacggttcacgtacgcgaggttatc
cgcgacttaccgccgcttcgcagcaagctaagtaatggtgatgactctgcaagaaattgg
agcataactgttaaaaaccatctagttgagttagctgaagaggctctagacaagaatatg
gatcgtttgtccgcacatcttaagcgatactccaaacaggttcgtgttggtttgtctccg
ggcgcactccattgcccgaaaagcgcgttgtcgagagaggtcccatattacacagactgg
tatctcgactcgaaactccgcttttggctgaaccatgaaagccgaagtcacatgacaagc
gatcttcgacgatatggatatgccgccgcttacgccgcacttaacgaccgttctccaaaa
ggtcatgaagaattttctctcgctggtttggcacccaatcatgaaaattgggaaagtggg
aaattcgcggatcgctttcgcgtccaacgttacgatgcaccggcatcaaccatcacaagc
catatagcaaaagacggacattactttatccatcccgatccagcacagtgtcgcagctta
acggttcgtgaagctgctcggctacagaccttccccgacaactacttctttcaaggaaac
cgcactcaacaatatcatcaggtcggtaatgcggttccaccattgctagcaaaaatgatc
gctcaaatagttaaagaaattcttacttga
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