Collimonas arenae: LT85_2272
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Entry
LT85_2272 CDS
T03512
Name
(GenBank) diguanylate cyclase (GGDEF domain) with PAS/PAC sensor
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
care
Collimonas arenae
Pathway
care02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
care00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LT85_2272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
care02022
]
LT85_2272
Enzymes [BR:
care01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
LT85_2272
Two-component system [BR:
care02022
]
CheA family
WspE-WspRF (chemosensory)
LT85_2272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
Motif
Other DBs
NCBI-ProteinID:
AIY41430
UniProt:
A0A0A1FCD0
LinkDB
All DBs
Position
complement(2531790..2532806)
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AA seq
338 aa
AA seq
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MYNELNLDTDQPPDDYPVMVLLVDDQAMVGEAVRRALANQINIDFHYCAHPDEAIEAAQR
TRPTVILQDLVMPGIDGLTLVRQYRANPGTRNVPIIVLSTREDPAVKSAAFTAGANDYLV
KLPDTIELVARIRYHSRSYVNLLQRDEAYRALRQSQQQLLETNLELQRLTNSDGLTGLAN
RRYFDEYFSAEWKRAEREQSPLSLLMIDVDDFKLYNDTYGHLAGDTALKQVAESIGNFAR
RPTDLAARIGGEEFVLVLPSMSREHMEAQGDKLQAAVHALNIAHASSSNDTRVTISIGGA
SMMPQRGSSQEKLVEAADQALYRAKRGGKNRVEIAQET
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgaattaaatctcgataccgatcaaccgccagacgattatccggtcatggtg
ctgctggttgacgatcaggccatggtgggcgaagccgtgagacgcgccctggccaaccag
atcaatatcgatttccattattgcgcgcatcccgacgaggcgatcgaggccgcacaacgg
acccgacccaccgtgatcctgcaggatctggtgatgcccggcatcgacggcctgactttg
gtgcgccagtatcgcgccaatcccggtacccgcaacgtgccgatcattgtgctctcgacg
cgcgaagatcccgcagtcaaaagtgctgcatttaccgccggggccaacgattatctggtc
aagctgccggacaccatcgaactggtggcgcgtatccgctatcactcgcgctcctatgtg
aacctgttgcaacgcgacgaagcctaccgcgcgttgcggcagagccagcagcaactgctg
gaaaccaatctcgaattgcaacggctgaccaattcggatggcctgaccgggctcgccaac
cgccgttatttcgacgaatatttcagcgccgaatggaaacgtgccgaacgtgaacaaagc
ccgctttcgctgctgatgatcgacgttgacgatttcaagctgtacaacgacacctacgga
catttggccggcgataccgccctcaagcaagttgcggaaagcatcggcaattttgcgagg
cgccctaccgatctcgcggcccgtatcggcggcgaagagtttgtgctggtgctgccgtcg
atgtcgcgcgagcacatggaagctcagggcgacaagctgcaagcggcagtacatgccttg
aacatcgcccatgcgtcgtccagcaacgataccagggtcactatcagcattggcggcgcc
agcatgatgccgcaacgcggcagttcacaggaaaaactggtggaagcggccgaccaggcg
ctctaccgcgccaagcgtggcggcaagaaccgggtggaaatcgcgcaagaaacctga
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