Clostridium argentinense: RSJ17_20765
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Entry
RSJ17_20765 CDS
T05123
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carg
Clostridium argentinense
Pathway
carg03420
Nucleotide excision repair
carg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSJ17_20765
03430 Mismatch repair
RSJ17_20765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carg03400
]
RSJ17_20765
Enzymes [BR:
carg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSJ17_20765
DNA repair and recombination proteins [BR:
carg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSJ17_20765
MMR (mismatch excision repair)
Other MMR factors
RSJ17_20765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C_2
UvrD_C
Viral_helicase1
DEAD
PhoH
nSTAND3
Mg_chelatase
SLFN-g3_helicase
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
ARC86749
LinkDB
All DBs
Position
complement(4460403..4462631)
Genome browser
AA seq
742 aa
AA seq
DB search
MNNFEPDNHEEILYLESTLGFIEKELEKEKEELNGRLSKVIASRKEMWEQTSHSSNDFDK
VPEMNQYLFEVNNQTQSYESTLKKIKKYERMIKSPYFGRFDFKEDDFDDTEKIYIGIYNL
MDQETNSILVYDWRSPISSMFYQCEVGRGSYNSPVGIIYGNILMKRQYKIENSKLKYFFD
SSIRINDEILQQVLCNNSSSKMKNIVETIQKEQDIIIRDTENHLLIVQGVAGSGKTSIAL
HRIAFLLYIGMDSKINSNNVIIISPNSIFSKYISGVLPELGEENVEQITFDDIIYKFLGS
NSKFESRNDQLESLILLNNIQKSHVKMQSIEFKGSKEFIKLLDRLIEYFEHNLIEFQDIY
YNGKIIETRQQIKNQFLNNKIGMPIAKRLGRIENIILNKIHPLRKIRIEKIEKIVQNSPN
HEFEIKSFSRLLSIKESKVFMKNIHRFTKVDYMDLYKILFNKNDILLKLSKGLNLPREIE
EIILETKENLNNGHICYEDCAPLLYIKLKLEGNEEFSEIRQVVIDEAQDYYPLQYEVFKL
LFNGARYTMLGDFNQTLEKYGDKSLYDDIEEILHKKKSVKLFLNKSYRASIEINSFSKKI
LNIKEDFISFERHEHEPVITFKESKELIYENIIKDIDCYYKEGYESIAIICKTQQESDEI
EEGLNRLTHIKLLNIKGGEFEKGTLVIPAYMAKGLEFDVVIIYNASKDNYKSEFDRKLLY
IASTRALHRLAVYYTGEKCSFI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgaataattttgaaccagacaatcatgaggaaattctatatcttgagagtacgctaggc
tttatagaaaaagaactagagaaagaaaaagaagagttaaatggcagattaagtaaagta
atagcttccagaaaagagatgtgggagcaaacatcccattcttcaaatgattttgataaa
gttccagaaatgaaccaatacctttttgaagtaaataatcaaacacagagctatgaaagt
acattgaaaaaaataaaaaaatatgaacgtatgataaaatctccttattttggacgattt
gattttaaagaagatgattttgatgatacagaaaaaatatatatcggtatctataattta
atggatcaagaaacaaattcaattttagtatatgattggcgatctcctatttctagtatg
ttttatcaatgtgaggttggtagaggttcatataactcaccagttggaataatttatggt
aatatcctaatgaaaagacagtataagattgaaaactcaaaacttaaatacttttttgat
agcagtataagaattaatgatgaaattttacaacaggtattatgtaataattcatcttca
aagatgaaaaatattgttgaaactattcaaaaagagcaagatataattattagagatact
gaaaatcatcttttaattgtgcaaggagtggcaggcagtggtaaaacatctatagctttg
catagaatcgcatttttactttatataggaatggattcaaaaataaattctaacaacgtt
ataataatttctccaaattctatttttagcaaatatatttctggggttttacctgagcta
ggagaggagaatgtggaacaaatcacttttgatgatattatctataaatttttaggaagt
aattctaaatttgaaagtagaaatgatcaacttgagtctctaattcttcttaataatatt
caaaaatcccatgtaaaaatgcaaagcatagaatttaaaggttctaaagaatttataaaa
cttcttgatagattaatagaatattttgagcataatttaattgagtttcaagatatttat
tataacggtaaaattattgaaacaagacaacaaataaagaatcaatttcttaataataaa
attggtatgccaatagcaaaacgacttggaagaattgaaaatatcatattaaataaaatt
catcctttaagaaagataaggattgaaaaaattgagaaaattgtacagaatagtcctaat
catgaatttgaaataaagtcttttagtagactactttctataaaagaatcaaaagtgttt
atgaagaatatccatagattcactaaagttgattatatggacctatataaaatacttttt
aataaaaatgatattctattaaaactatctaaaggattaaatcttcctagagagattgaa
gaaataatattagaaactaaagaaaatcttaataatggacatatttgttatgaagattgt
gcaccacttttatatattaaattaaaactagaaggtaatgaagagttttcagagataagg
caggtagttattgatgaagcacaagattattatccacttcaatatgaggtttttaagctt
ttatttaatggggcaaggtatacaatgttaggtgattttaaccagacgcttgaaaaatat
ggagataaatccctatatgatgatatagaagaaatactacacaagaaaaaatcagtgaaa
ctttttttaaataaaagttatagagcttctatagaaataaactctttttctaaaaaaata
ttaaatattaaagaggattttatttcttttgaaagacatgaacatgagccagtaattaca
ttcaaagaaagtaaagaattaatttatgagaacattataaaagatattgattgctactat
aaagaaggctatgaatctattgcaatcatttgtaaaactcagcaagagtcagatgaaatt
gaagaaggattaaatagattaacccatattaaattattgaatataaaaggtggtgaattt
gaaaaaggtactttagttattcctgcatatatggcaaaaggattagaatttgatgtggtt
attatatataatgcttcaaaagataattataaaagtgaatttgataggaagcttttatat
atagcgtctacaagagcattacaccgactagctgtatattatactggagaaaaatgcagc
ttcatttaa
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