Clostridium asparagiforme: NQ535_24200
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Entry
NQ535_24200 CDS
T08571
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
casp
Clostridium asparagiforme
Brite
KEGG Orthology (KO) [BR:
casp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
casp03016
]
NQ535_24200
Enzymes [BR:
casp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NQ535_24200
Transfer RNA biogenesis [BR:
casp03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NQ535_24200
Prokaryotic type
NQ535_24200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UWO75875
LinkDB
All DBs
Position
complement(5370217..5371128)
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AA seq
303 aa
AA seq
DB search
MLDICLLGTGGMMPLPYRWLTSMMARCGGSNLLIDCGEGTQIALKEKGWSPKPIDVICFT
HYHADHISGLPGLLLTMGNAERTEPLTLVGPKGLERVVGALRTIAPELPFELRFIELTEN
RERLQLGPYVIDAYRVNHNVICYGYAVSILRTGRFDVDKAREQEIPQRFWSRLQKGEEIE
HEGRLLTPDLVLGPDRKGLKVVYCTDTRPVPVIAEYAEGADLFICEGMYGEKEKAAKARE
YKHMTFYEAAELAKKAQPAEMWLTHYSPSLTRPEEYMNEVRQIFPRAKAAKDGWTVELGF
AED
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgctggatatatgtttattgggaacaggcgggatgatgccgctgccctaccgctggctc
acatccatgatggcccggtgcggcggcagcaacctgctaatcgactgcggcgagggcacg
cagattgcgcttaaggagaagggctggagccccaaacccatcgacgtgatctgctttacc
cattaccacgcggaccacatcagcggccttccggggctgctgttgaccatgggaaacgct
gagcggaccgagccgttgacgcttgtaggccccaaggggctggagcgggtggtgggggct
ctgcgcaccatcgctccggagctgccctttgagctgcgctttatcgagctgacggagaac
cgggagcggctgcagctggggccctatgtgatcgacgcctaccgggtgaaccataatgtg
atctgttacggttacgctgtctccatcctccgcaccggccgtttcgacgtggataaggcc
cgggagcaggagattccgcagagattctggagccgtctgcagaaaggcgaggagattgag
cacgagggacggctgctgacgccggatctggtgctgggaccggaccggaaagggctcaag
gtggtctactgtacggatacccggccggtgcccgtgatcgcggagtacgcggaaggtgcg
gacctgtttatctgcgaaggcatgtacggcgagaaggagaaggccgccaaggcccgggag
tacaagcatatgaccttctacgaggcggcggagctggccaaaaaggcccagccggcggag
atgtggctgacccattacagcccctccctgaccaggcccgaggagtatatgaacgaggtg
cgccagattttcccgcgggcaaaggccgcaaaggacggctggacggtggaactgggattt
gcggaagattag
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