Cygnus atratus (black swan): 118246373
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Entry
118246373 CDS
T09349
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118246373 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cata04040
]
118246373 (CNGB1)
Ion channels [BR:
cata04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118246373 (CNGB1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
118246373
NCBI-ProteinID:
XP_050569141
LinkDB
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Position
12:complement(11395327..11427649)
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AA seq
1192 aa
AA seq
DB search
MLGWIERVVPQPPAPCLMEESPPAPVMEPAKVPAGKASSPRDAADSTRTQETEKKVEFAV
PEEMVPASTSVFESVGGSVLSWLSQGLEKVIPQPVHAPGTLQALGRSFETSIDVPDQTEV
QVLKDEEEDVLEITPFDPEEDEPDGCETEAGLDTGAEDWAGARVLSWLVQGFERMVPQPE
MLKKPEPEPKEERHKAAAGAGTKGTKTQTKLKESVSAAPSIPGTVEPAAADGQSEPVTTI
LPRSLVGDSSSMFGWFVQGLEKVMPQPVTREKQDTQGAAAAAFSPVEEIHIVPVELVETD
LVVEDINDDWSDEVAHEPTAWVGMAELVAQGRPLPPIEEELQEEETRLCSCSLSAAEEEQ
EEEGEEEEEEVEEKKEEEEEVEESVGAPLQSPCLPTDEGLEDAFFAEEALSFAQLEEAEI
SDLEGAFVQVEEKTAEVTETDAEGLSHCLTVGVEDVDGGGDAAEDDGTCLPLPTPGDPHM
LVVPGAAPASPRKKLPAPADNLDEAPASWDELQRDSLPERIGSATSQSSTIINDRLQELV
KLFKERTEKVKEKLTDPDVTSDDESPSASPSKPVPTAPPPPPPGEVPPGDKAAGDEHYCE
MLCCAFKCRPWLDRLKSYQFPSSIDPLTNLMYVLWLFFVVLAWNWNCWLIPVRWAFPYQT
PSNIHFWLLVDYVCDLIYLLDVIVFQTRLQFVRGGDIISDKKAMKENYLHSQRFKMDVVC
LLPLDFFYFKVGVNPLLRFPRCLKYMAFFEFNNRLEAILSKAYIYRVIRTTAYLLYSLHV
NSCLYYWASAYEGLGSTTWVYDGEGNSYIRCYYWAVKTLITIGGLPDPKTLFEIVFQLLN
YFTGVFAFSVMIGQMRDVVGAATAGQTYYRSCMDSTIKYMNFYKIPKTVQNRVKTWYEYT
WHSQGMLDESELLVQLPDKMRLDIAIDVNYNIVSKVALFQGCDRQMIFDMLKRLRSVVYL
PNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKTVLVTLKAGSVFGEISLLAAGGGNRRTA
NVVAHGFANLFILDKKDLNEILVHYPESQKLLRKKAKKMLKNNNKPKDVKGQPGSPLIIP
PKADTPKLFQAALAAMGKAGGKGRLAHLRWKLQELKAMQTAQDPSFSPIPPKSPVHRRSP
TASPKASTPPGEEIFSKSSDNLVAIRVISAAQEDEEILAAEISQKEEEEEGK
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgttgggctggattgagcgggtggttccccagccccccgcgccgtgcctgatggaggag
agccccccggccccggtcatggagccagccaaggtgccagcagggaaggccagcagcccc
agggatgctgcagacagcacacgcacgcaggaaactgaaaagaaggtggaatttgcagtg
cctgaggagatggtccccgcatcaacatcggtgtttgagagcgtggggggcagtgtgctc
tcctggctctcccaggggctggagaaggtgatcccgcagccagtccatgccccagggacg
ctgcaggcactcgggaggagcttcgagacaagcattgatgttcctgaccagacggaggtc
caggtcctcaaggatgaagaagaggatgttctggagataacccccttcgacccggaggag
gacgagccagatggctgcgagacggaggccggtttggacacgggtgcagaggactgggca
ggagcacgtgtgctgagctggctggtgcagggcttcgagagaatggtgccgcagccggag
atgctgaaaaagcctgagccagagccgaaggaggagaggcacaaagctgcggcaggagca
ggcacaaaagggactaaaacccagacgaagttgaaagaaagtgtttcagctgccccgagc
atcccgggaacagtggagccagcagctgctgacgggcagtcagagcctgtgaccaccatc
ctccctcgttccctggttggggacagcagcagcatgtttggatggtttgtccaggggctg
gagaaggtgatgccacagcctgtgaccagggagaagcaggacacacagggagcagcagcg
gcagccttcagccccgtggaagaaattcatatcgtccctgtggagcttgtggagacagac
ctagttgtggaagacatcaatgacgactggagcgatgaagtagctcacgagccaacggcc
tgggttggcatggctgaactggtggcacagggtcgtcctcttccccccatagaggaggaa
cttcaggaagaagagaccaggctgtgctcctgctccctgagtgctgctgaggaggagcag
gaggaggagggtgaagaggaggaggaggaagtggaggagaagaaggaagaggaggaggag
gtggaggagagcgtgggagccccgctccagtctccttgcctccccaccgatgaggggctg
gaggacgccttctttgcagaagaggccctcagttttgcgcagctagaagaagctgagata
agtgatctagaaggtgcttttgtacaggtggaagagaagacggctgaagttactgaaact
gatgctgaagggctgagtcactgcctcactgtgggtgtcgaggacgtggacggcggaggt
gatgctgcagaggatgatggcacctgcttgccgctgcccacccctggtgacccccacatg
ctggtggtgcctggtgctgcaccagcgtcccccaggaagaagctgccagcccccgcagac
aacttggatgaggcaccggcgagctgggatgagttgcagagggacagcttgcccgagcgc
atcggttcagccaccagccagagcagtaccatcatcaatgaccggctccaggagcttgtg
aagctcttcaaagagcggacagagaaggtgaaagagaagctgaccgaccctgatgtcacc
tccgatgatgagagcccttcagcatccccctccaagccagtgcccacagcaccaccgccg
cccccaccgggagaagtgccaccaggggacaaggcagcaggcgatgaacactactgtgag
atgctgtgctgtgccttcaagtgccggccctggctggaccgcctgaagagctaccagttc
cccagcagcatcgacccgctcaccaacctgatgtatgtgctgtggctgttcttcgttgtt
ctggcctggaactggaactgctggctgatccccgtccgctgggccttcccttaccagacg
ccatccaacatccacttctggctgctcgtggactacgtctgtgacctcatctacctgctg
gacgtcattgtttttcagacccgcctgcagtttgttcgggggggagacataataagtgat
aaaaaggccatgaaagagaactacctgcattcacagcgctttaagatggatgtggtatgc
ctccttcccctggatttcttctacttcaaagtcggtgtcaacccactgctgcgttttccc
cgctgcctgaagtacatggccttcttcgagttcaacaaccgcctcgaggccatcctgagc
aaggcatacatctacagagtgattcggactactgcctatttactgtacagcttgcatgtg
aactcctgcctctattactgggcatcagcctacgaaggactgggctctaccacctgggtc
tatgatggggaaggaaacagctacatccgctgctactactgggcagtcaaaaccctcatc
accattgggggcctgccagaccccaagacgctcttcgagattgtcttccagctgctgaac
tacttcacgggtgtctttgctttctccgtcatgatcgggcagatgagagatgtggttggt
gctgctactgctgggcaaacttactatcggagctgcatggacagtactattaaatacatg
aacttctacaaaatccccaaaactgtgcagaaccgtgtcaaaacgtggtacgagtacacg
tggcattcacaaggcatgctagatgagtctgagctgctggtgcagctgccggacaagatg
cggctggacatcgccattgatgtgaactacaacatcgtcagcaaagtggccctcttccag
ggctgtgacaggcagatgatcttcgatatgctgaagcggctcaggtcggttgtctacctg
ccaaatgactacgtctgtaagaagggagagatcggccgcgagatgtatattatccaggct
ggacaagtgcaggtgctggggggacccgatggcaaaaccgtgctggtgacactgaaagct
ggatctgtgttcggagaaataagcttgctggcagcaggaggaggaaatcggcgaacagca
aacgttgtcgctcatggatttgctaatcttttcattttggataagaaggacttgaatgag
attttggtgcactacccagagtctcagaagttgctgcgtaagaaggccaagaaaatgctg
aaaaacaacaataaacccaaagatgtgaaaggacagcctggatctccgctgatcattccc
ccaaaggctgacacgccaaagctcttccaggcggccctggctgccatggggaaggcggga
ggcaaagggcgtcttgcgcacctccggtggaagctccaggagctgaaggcaatgcagaca
gcacaggatcccagtttcagtccaatcccaccgaagtcaccagtgcaccgcagatctcct
actgcttcccccaaagcaagcacccctccgggagaagaaatattctcaaaatcttctgat
aatttagtcgctatccgtgtgatttcagcagcgcaggaggatgaagaaatacttgctgct
gagatatcgcagaaagaagaagaggaagaagggaaatga
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