KEGG   Cygnus atratus (black swan): 118248986
Entry
118248986         CDS       T09349                                 
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
  KO
K08131  collagen type IX alpha
Organism
cata  Cygnus atratus (black swan)
Pathway
cata04510  Focal adhesion
cata04512  ECM-receptor interaction
cata04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cata00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    118248986 (COL9A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118248986 (COL9A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    118248986 (COL9A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cata00535]
    118248986 (COL9A3)
Proteoglycans [BR:cata00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   118248986 (COL9A3)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 118248986
NCBI-ProteinID: XP_035404381
LinkDB
Position
16:complement(3066038..3101281)
AA seq 675 aa
MTVFPTLGLLFLCQLLATTSAQRVGPQGPPGPRGPPGPSGKDGIDGEPGPPGLPGPPGPK
GAPGKPGAAGEAGLPGLPGVDGLTGTDGPPGPNGPPGDRGALGPAGPPGQAGKGLPGPPG
PPGPSGLPGGNGFRGPPGPYGLPGFPGPPGPPGPPGLPGIFPDGGGDIQCPALCPPGPPG
PPGMPGFKGHTGHKGEPGEIGKEGEKGNPGPPGPPGIPGSVGLQGPRGLRGLPGPMGPAG
ERGDIGFRGPPGIPGPPGKAGDQGNKGPQGFRGPKGDTGRPGPKGNPGARGLIGEPGIPG
KDGRDGAPGLDGEKGDAARMGAPGEKGPNGLPGLPGRAGIKGSKGEPGSPGEMGEAGPSG
EPGIPGDVGIPGERGLPGPRGATGPLGLQGPMGAPGVRGFQGPKGASGEPGLPGPTGIRG
EFGDRGPTGVTGPKGNQGIAGADGLPGDKGELGPFGPPGQKGEPGKRGELGPKGVQGPNG
TAGVPGIPGHPGPMGHQGEQGVPGITGKPGPPGKEASEQHIRELCGEMINDQIAQLAANL
RKPLSPGMTGRPGPAGPPGPPGATGSVGHPGARGPPGYRGPTGELGDPGPRGDTGEKGDK
GPVGQGIDGPDGDQGLQGLPGVPGISKNGRDGAQGEPGLPGDPGTPGAIGAQGTPGICDT
SACMGAVGASTSKKS
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgactgtattccccactcttgggctcctcttcctttgtcagctattagccaccacctca
gctcagagagtaggaccacaaggccctcctggaccccgaggaccccctggaccatctggc
aaggacggcatagatggcgagccgggccctcctggtttgccaggcccaccagggccaaag
ggtgcaccaggaaagcctggagcagctggtgaagctggattgcctggccttcctggagta
gatggtttaacgggaactgatggcccacctggcccaaatgggcctccgggagaccgtggt
gcattaggacctgccgggccacctggacaagctggcaaaggactaccaggacctccaggg
cctccaggacccagtgggcttccaggtggaaatggatttcggggtcctcctggtccttat
ggtctgcctggattcccagggcctcctggaccacccggacctcccggtcttccaggcatc
tttcctgatggcggtggggacatccagtgcccagctctgtgcccaccgggtcctccaggt
cctccaggaatgccagggttcaagggacacactggtcacaaaggagaacctggtgaaata
ggaaaagaaggagagaagggcaaccctggccctccaggtcctccaggcattcctggcagt
gttggcctgcagggcccaagaggactaagaggcctccctggtccaatgggtccagctggt
gagaggggtgacattggtttcagagggccacctggaatcccaggacctccagggaaagct
ggagaccaaggaaacaaaggacctcaaggattcagaggacccaaaggtgacactggtaga
cctggaccaaaaggaaacccaggggcacgtggactcataggagaacctggcatacccggc
aaggatggacgggatggagctcctggactcgatggtgagaagggtgatgcagctcgcatg
ggtgctcctggagagaagggaccaaacggacttcctggactgcctggaagagcaggtatt
aaaggctcaaagggtgaaccaggcagtcctggagagatgggagaggcaggtccctctgga
gagccaggcatccctggtgatgtcggtattcctggtgagagaggtctgccgggacccaga
ggagcaactggcccgcttggtctccaaggcccgatgggagcccctggtgtcagaggtttc
cagggtcctaaaggtgccagcggggaacctggccttcccggtccaactggaattcgtgga
gagtttggtgacaggggccctaccggtgttactggtcccaaaggtaaccagggcattgct
ggagcagatggcctcccaggtgacaaaggagaactgggtccctttggtccccctggccaa
aaaggagagccaggaaaaagaggagaacttggtcccaaaggtgtccagggacctaacggg
acagctggagttccagggattccaggacacccagggcccatgggccatcaaggggagcaa
ggcgttcctggcatcacaggaaaacctgggcctcctggcaaagaggccagtgaacaacat
ataagagaactctgtggggagatgataaatgatcaaattgcccagttagctgctaacctg
aggaagcccttgtctccgggaatgacgggtcggcctggcccggctgggcccccagggcct
cctggggctacgggaagcgttgggcatcccggtgctcgtgggcctcctggctacagaggg
ccaacaggagagcttggggatcctggtcccagaggtgacactggcgaaaagggagataaa
ggacccgttggacaaggcatcgatggacccgacggcgatcaaggacttcaaggacttcct
ggtgtacctggaattagtaaaaatggtcgtgacggtgctcagggcgaacccggtcttcca
ggggatcctggtactcctggtgctattggggctcagggaactccaggaatatgcgacaca
tcggcttgcatgggagctgttggagcatcgacttccaaaaaatcataa

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