KEGG   Cygnus atratus (black swan): 118255062
Entry
118255062         CDS       T09349                                 
Symbol
UBB
Name
(RefSeq) polyubiquitin-B isoform X1
  KO
K08770  ubiquitin C
Organism
cata  Cygnus atratus (black swan)
Pathway
cata03320  PPAR signaling pathway
cata04120  Ubiquitin mediated proteolysis
cata04137  Mitophagy - animal
cata04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cata00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118255062 (UBB)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118255062 (UBB)
   04137 Mitophagy - animal
    118255062 (UBB)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    118255062 (UBB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cata04121]
    118255062 (UBB)
Ubiquitin system [BR:cata04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118255062 (UBB)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 118255062
NCBI-ProteinID: XP_050570745
LinkDB
Position
20:7807174..7812394
AA seq 457 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
NT seq 1374 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaagaccctgactggcaagaccatcactcttgaggttgagcccagc
gataccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtctgactacaac
atccagaaagaatccaccttgcaccttgtgctgcgcctgaggggtggcatgcagatcttt
gtgaagacgctgactggcaagaccatcacccttgaggttgagcccagcgataccattgag
aatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccaacagaggctgatc
tttgctggcaagcagctggaagacgggcgcaccctgtctgactacaacatccagaaggag
tccaccttgcaccttgtgctgcgcctgaggggtggcatgcagatctttgtgaagacgctg
actggcaagaccatcacccttgaggttgagcccagcgataccattgagaatgtgaaggcc
aagatccaggacaaggaaggcattcctcctgaccaacagaggctgatctttgctggcaag
cagctggaagacgggcgcaccctgtctgactacaacatccagaaggagtccaccctacac
cttgtgctgcgcctgaggggtggcatgcagatctttgtgaagaccctgacaggcaagacc
atcactcttgaggttgagcccagcgataccattgagaatgtgaaggccaagatccaggac
aaggaaggcattcctcctgaccagcagaggctgatcttcgctggcaagcagctggaagac
gggcgcaccctgtctgactacaacatccagaaggagtccaccctacaccttgtgctgcgc
ctgaggggtggcatgcagatctttgtgaagacgctgactggcaagaccatcacccttgag
gttgagcctagtgacaccattgagaatgtgaaggccaagatccaggacaaggaaggcatt
cctcctgaccagcagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctg
tctgactacaacatccagaaagaatccaccttgcaccttgtgctgcgcctgaggggtggc
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagc
gataccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtctgactacaac
atccagaaggagtccaccttgcaccttgtgctgcgcctgaggggtggctgttag

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