Cygnus atratus (black swan): 118255062
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Entry
118255062 CDS
T09349
Symbol
UBB
Name
(RefSeq) polyubiquitin-B isoform X1
KO
K08770
ubiquitin C
Organism
cata
Cygnus atratus (black swan)
Pathway
cata03320
PPAR signaling pathway
cata04120
Ubiquitin mediated proteolysis
cata04137
Mitophagy - animal
cata04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118255062 (UBB)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118255062 (UBB)
04137 Mitophagy - animal
118255062 (UBB)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
118255062 (UBB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cata04121
]
118255062 (UBB)
Ubiquitin system [BR:
cata04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
118255062 (UBB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
118255062
NCBI-ProteinID:
XP_050570745
LinkDB
All DBs
Position
20:7807174..7812394
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AA seq
457 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGC
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagaccctgactggcaagaccatcactcttgaggttgagcccagc
gataccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtctgactacaac
atccagaaagaatccaccttgcaccttgtgctgcgcctgaggggtggcatgcagatcttt
gtgaagacgctgactggcaagaccatcacccttgaggttgagcccagcgataccattgag
aatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccaacagaggctgatc
tttgctggcaagcagctggaagacgggcgcaccctgtctgactacaacatccagaaggag
tccaccttgcaccttgtgctgcgcctgaggggtggcatgcagatctttgtgaagacgctg
actggcaagaccatcacccttgaggttgagcccagcgataccattgagaatgtgaaggcc
aagatccaggacaaggaaggcattcctcctgaccaacagaggctgatctttgctggcaag
cagctggaagacgggcgcaccctgtctgactacaacatccagaaggagtccaccctacac
cttgtgctgcgcctgaggggtggcatgcagatctttgtgaagaccctgacaggcaagacc
atcactcttgaggttgagcccagcgataccattgagaatgtgaaggccaagatccaggac
aaggaaggcattcctcctgaccagcagaggctgatcttcgctggcaagcagctggaagac
gggcgcaccctgtctgactacaacatccagaaggagtccaccctacaccttgtgctgcgc
ctgaggggtggcatgcagatctttgtgaagacgctgactggcaagaccatcacccttgag
gttgagcctagtgacaccattgagaatgtgaaggccaagatccaggacaaggaaggcatt
cctcctgaccagcagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctg
tctgactacaacatccagaaagaatccaccttgcaccttgtgctgcgcctgaggggtggc
atgcagatctttgtgaagaccctgactggcaagaccatcacccttgaggttgagcccagc
gataccattgagaatgtgaaggccaagatccaggacaaggaaggcattcctcctgaccag
cagaggctgatcttcgctggcaagcagctggaagacgggcgcaccctgtctgactacaac
atccagaaggagtccaccttgcaccttgtgctgcgcctgaggggtggctgttag
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