Cygnus atratus (black swan): 118260560
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Entry
118260560 CDS
T09349
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
cata
Cygnus atratus (black swan)
Pathway
cata04010
MAPK signaling pathway
cata04020
Calcium signaling pathway
cata04510
Focal adhesion
cata04518
Integrin signaling
cata04540
Gap junction
cata04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118260560 (PDGFRB)
04020 Calcium signaling pathway
118260560 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
118260560 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118260560 (PDGFRB)
04540 Gap junction
118260560 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
118260560 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cata01001
]
118260560 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cata04090
]
118260560 (PDGFRB)
Enzymes [BR:
cata01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
118260560 (PDGFRB)
Protein kinases [BR:
cata01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
118260560 (PDGFRB)
CD molecules [BR:
cata04090
]
Proteins
118260560 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
BACON_2
Motif
Other DBs
NCBI-GeneID:
118260560
NCBI-ProteinID:
XP_035426809
LinkDB
All DBs
Position
14:complement(5989796..6018895)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLCPSLKALLRLLILTGLLEVTTGGSGLRIEPENAELILSLHSTFSLVCYGDGALVWEWD
GQPLTASLEQRDGAFVSNLTLRNVTGRHTGEYACTYSPDQAPEQAERKAIYIYVPDPSLA
FLPPTTSEELFIFITGYKEAVIPCRVTDPHLQVTLYEKKVENPIPAAYDPQQGFKGFFED
KTYYCQTIVDDQEVDSDTFYVYRIQVSSVNVSISAVQTVVRQGENVTLMCTVSGNELVNF
NWDYPRKQAGKAVEPVTDFLPGSSHDIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKD
ITVQVIERGFVKFHTQLASTVYAEVHKSHTIQVDVEAYPQPSIVWLKNNKVLTMESSSEF
TITNRNLSETRYQTSLVLVRVKQEEGGFYTIRAANEDDVQELSFHLQINVPAKVVDLKEN
SSATSGEQTVTCSAEGMPQPEISWSTCSDIKWCSTKGQPTRLLGNNSAEISLQTNATYHA
ELQVYRVNSTLQLHRVDEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSSWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQAYGDKAHRETEAYGNTAKEDHV
HSHLSLSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYDIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPTIPGLNNTRLTPSSPTSSILYTAVHQNGGENDYI
IPLPDPKPEAVCDLPQEASISCASSMLNEANTSSTISCDSPLGTQQDEEQGSDPQLGCQE
PTTGHHEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcccctctctgaaggctttgctgcggctcctcatcctcaccggtctgctggag
gtaacgacgggaggcagcgggctgcgcatcgaacccgaaaatgccgagcttatccttagc
ctccacagcaccttctccctcgtgtgctacggggacggcgcgctggtctgggagtgggac
ggccagcctctcaccgcctcactggagcagagggacggggccttcgtcagcaacctcacc
ctcaggaacgtgacgggccgtcacaccggggagtacgcctgcacctacagccccgaccag
gctccagagcaagcggagaggaaagccatttacatctacgtgccagatccctccctagcc
tttctccccccaaccacctctgaagagctcttcatcttcatcacgggctacaaagaggcc
gtcatcccatgccgtgtgaccgacccgcacctgcaggtcaccctctatgagaagaaagtg
gagaaccccattccagctgcttacgacccgcagcagggtttcaagggcttctttgaggac
aagacctactactgccagacaatcgtggacgaccaggaggtggattcagacaccttctat
gtctacaggatccaggtctcatctgtgaacgtctccatcagcgcagtgcagaccgtggtg
cgtcagggagaaaacgttaccctgatgtgcaccgtgagcggcaatgagctggtcaacttc
aactgggattatccccgcaagcaggcagggaaggctgtggagccagtgaccgacttcctg
ccgggatcctcccacgatatccgctccatcctcatcatccagaacgcagagctggaggac
agcgggacctacgtctgcaatgtctctgagggctaccacgagaaaacagatcggaaagac
atcacagtccaagtgatcgagcgtggctttgtgaagttccacacccagctggccagcaca
gtgtacgctgaggtccacaagagccacaccatccaggtggacgtggaggcctacccacag
cccagcatcgtgtggctgaagaacaacaaggtgttgaccatggagagcagcagcgagttc
accatcaccaacaggaacctgtcagaaaccaggtaccagacgtccctggtcctggtgcgg
gtgaagcaggaagaaggaggattttacaccatccgggctgccaacgaggacgatgtgcag
gagctgtccttccatctgcagataaatgtgccagccaaagtggtggatctcaaggagaac
agcagtgccaccagtggggagcagaccgtaacgtgctctgctgaagggatgccccagcca
gagatcagctggtccacctgcagtgacatcaaatggtgcagcaccaaggggcagcccacc
cggctgctggggaacaactcggcagagatcagcctgcagaccaatgccacgtaccacgcg
gagctgcaggtgtaccgtgtgaacagcaccctgcagctgcacagggtggacgagcccctg
ctcctgagatgcacagtgcaaaacttcctgggcaccaactcccaggacatcaccctggtc
ccgcacgccctgccattcaaagtggtcatcatctccgtcatcctagccttgctggtcctc
accgtcatctccctgatcatcctgatcgtcctgtggcagaagaaacctcgttacgaaatc
cgctggaaggtgatcgagtcagtcagctccgatgggcacgagtacatctacgtggatccc
atgcaactcccctatgactccagctgggaggtgcccagggacaagctggtgttaggacgc
acccttggctccggggccttcggacgcgtggtggaggcgacagcccatggcctgagccac
tcgcagtccaccatgaaggtggcggtgaaaatgctcaagtccacggcccgcagcagcgag
aagcaggccctcatgtccgagctgaagatcatgagccacctggggcctcacctcaacatc
gtcaacctgctgggggcctgcaccaaaggagggcccatctacatcatcaccgagtactgc
cgctatggggacctggtggactacctgcaccgcaacaagcacaccttcctgcaggcctac
ggcgacaaggcccaccgggagaccgaggcatacgggaacaccgccaaggaggaccatgtg
cacagtcacctctccttgtctgtcgagagcgatgggggctacatggacatgagcaaggat
gactccctggattacgtgcccatgtccgacatgaagggagaagtcaagtatgctgacatc
gagtcctctaactacggcaccccgtacgagctggacagctattccccttcagctcccgaa
agaacagaccgggtgacactgataaacgagtctcctctcctcagctacatggacttggtg
ggcttcagcttccaggtggccaacgggatggagttcctggcttccaaaaactgtgtgcat
cgcgacctggctgccaggaacgtcctcatctgtgaggggaagctggtgaagatctgcgac
tttggcctggcgagggacatcatgagggattccaactacatctccaaaggcagtaccttc
ttgccccttaagtggatggccccagagagcatcttcaacaacctctacaccaccctgagt
gatgtgtggtcctttgggattctcctctgggagatattcactctaggagggactccatac
cccgaactgcccatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aagcccacccatgcctccgatgaaatctacgatatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgctcatggggaacctcttggtggat
tgctacaggaagaggtaccagcaggtggatgaagagttcatgaagagcgaccaccccgct
gttgtccgcacaagacctacgatccccgggctgaacaacaccaggctcactcccagctcc
cccaccagcagcatcctctacacggccgtgcaccagaacgggggcgagaacgactatatc
atccctcttcctgaccccaagcccgaggcggtctgcgacctccctcaggaggcctccatc
agctgcgccagctctatgctgaacgaagcaaacacatcatctacgatatcctgtgacagc
cccctgggcacccagcaggacgaggagcagggatccgacccgcagctgggctgccaggag
ccgaccacagggcaccacgaggtagaggagagcttcctctag
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