Cygnus atratus (black swan): 118260575
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Entry
118260575 CDS
T09349
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
cata
Cygnus atratus (black swan)
Brite
KEGG Orthology (KO) [BR:
cata00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cata03000
]
118260575 (CDX1)
Transcription factors [BR:
cata03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
118260575 (CDX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
118260575
NCBI-ProteinID:
XP_035426841
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All DBs
Position
14:6025024..6034674
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AA seq
259 aa
AA seq
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MYVGYLLDKDTNMYPSPVRHPSLNLNPQNYVPGPPQYSDFASYHHVPGINSDPHHGQPAA
AWGSPYTPAKEDWHSYGTATASSTANPGQFGFSPPDFNPMQPPGSGLLPPPISSSVPQLS
PNAQRRTPYEWMRRSIPSTSNSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKMQQQSQPTSTTTPTPPAVGTPGPMGALCGS
SAPSLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaggctatcttctggataaggacaccaacatgtatcccagccccgtccggcac
cccagcctcaacctcaacccccagaactacgtgccggggccgccccagtactcggacttc
gccagctaccaccatgtgccggggattaacagcgacccgcaccatgggcagccggcggcc
gcctggggctctccctacacccctgccaaggaggactggcactcgtacggcaccgccacc
gcctcgtccaccgccaacccggggcagttcggattcagccccccggattttaaccccatg
cagcccccgggctctggactcctgcctccgcccatcagcagctcggtcccccagctctcc
cctaacgcgcagaggcgcaccccgtacgagtggatgaggcgcagtattcccagcaccagc
aacagcgggaagaccaggacgaaggacaagtaccgcgtggtgtacacggaccaccagcgc
ctggagctggagaaggagttccactacagccgctacatcaccatccgccgcaaggccgag
ctggctgctgccctggggctcactgagcggcaggtgaaaatctggttccagaaccggcgg
gcaaaggagcggaaggtgaacaagaagaagatgcagcagcagagccagcccaccagcacc
accacgccgacccccccggccgtgggcacgccagggcccatgggtgccctgtgcggcagc
agcgccccgagcctcgtctcctcatcaccgctgaccatcaaggaggaattcatgccttag
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