Saccharobesus litoralis: C2869_10705
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Entry
C2869_10705 CDS
T05408
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
cate
Saccharobesus litoralis
Pathway
cate02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cate00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C2869_10705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cate03021
]
C2869_10705
Transcription machinery [BR:
cate03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2869_10705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AWB66874
UniProt:
A0A2S0VRP3
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All DBs
Position
complement(2991234..2993066)
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AA seq
610 aa
AA seq
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MEPNRQSQLKLLVAKGKEQGYLTYAEVNDHLPQEIVDSDQIEDIIGMINDMGIQVFETAP
DADQLLMAEETNTTDEDAAEAAAQALATVESEIGRTTDPVRMYMREMGTVELLTREGEIE
IAKRIEDGINQVQSSVAEYPDSMSHLLSEWDRYEAEEIRLSDIVTGFIDPNEVDDIAPTA
THVGSELSDEDLDDEDDDDSEEEEEDTGIDPEEAKEKFTELRKAYELVCSHIDAHGREDT
KSQLAIAALTELFREFRLVPKQFDLLVGNMRTMMDRVRTQERLIMKLTVEYAKMPKVEFM
RAFAGDESSTEWLSKAVASGKDYAPALERQRPDIERSILKLKSIEEETQLNIHAIKDINR
RMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEEL
AEQMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDATIDSPVDSATSESLKNA
TRDVLAGLTARESKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSR
SEQLKSFLDE
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaaccgccagtcacaactaaagcttctcgttgctaaaggcaaagaacaaggt
tatttaacctatgctgaagtcaacgatcaccttcctcaggaaattgtcgactcagatcaa
attgaagacatcattggtatgatcaacgatatgggtattcaggtgtttgaaacagcacct
gatgccgatcaacttttgatggctgaagaaaccaatactaccgatgaagatgcggctgaa
gcggccgcacaagcacttgcaacggtagaaagtgaaattggtcgtacgactgaccctgtg
cgtatgtacatgcgtgaaatgggtaccgttgaactactcactcgcgaaggcgaaatagaa
attgccaagcgcattgaagatggtattaaccaagtacaatcttcagttgctgaataccca
gattcaatgtctcacttattaagcgagtgggacagatacgaagcagaagagattcgctta
tctgacatcgtcactggctttatcgaccccaatgaagtagacgatatcgcacctaccgcc
acgcatgtcggctctgagttatcggatgaagatttagatgatgaagacgatgacgacagc
gaagaggaagaagaagatacaggtatcgatccggaggaagccaaagagaagttcactgaa
ttacgcaaggcatatgaacttgtctgtagtcatattgacgctcatggccgtgaagatacc
aaatctcaattagctattgcagcattaacagagttatttagagagttccgtttagttccc
aagcagtttgatctgctagtcggcaacatgcgcaccatgatggatcgtgttcgtactcaa
gaacgtttaatcatgaagttaaccgttgagtacgcaaaaatgcctaaagtggaatttatg
cgagcatttgccggtgatgaatcgtcaactgaatggttaagcaaagcggttgcttctggt
aaagattatgcgccagcacttgagcgccaacgcccagatattgaacgcagcattcttaaa
cttaagtcaattgaagaagaaacccagctaaacatccacgcgattaaagacattaaccgc
cgcatgtcaattggtgaagcgaaagctcgccgagccaagaaagagatggttgaagctaac
ttacgtttggttatttcaattgccaagaaatacactaaccgtggtttacagttcttggat
cttatccaagaaggtaacattggcttaatgaaagcggttgataagtttgaataccgtcgt
ggttataaattctcgacttacgcaacttggtggatccgtcaggccattactcgttcaatt
gctgaccaagcgcgtactatccgtattcctgtgcatatgattgaaacgatcaacaaattg
aatcgtatttctcgtcaaatgttgcaagaaatgggtcgtgaaccaactccggaagaatta
gcagaacaaatgctaatgccggaagacaagatccgtaaagtgttaaaaattgctaaagag
ccaatctcaatggagacacctattggtgacgacgaagattcgcatcttggtgattttatt
gaagatgctacaatcgactcacccgttgattcagctacttcagaaagcttgaaaaacgcc
actcgtgacgtattagccggcttaactgcacgtgaatctaaagtcttgcgtatgcgtttt
ggtattgatatgaataccgaccacacattagaagaagtgggtaaacaatttgacgtgaca
cgtgaacgtattcgccagattgaagcaaaagcattgcgtaaactacgccatccgtctcgc
tcagagcagcttaagagcttcttagacgaataa
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